KEGG   Geospiza fortis (medium ground-finch): 102031616
Entry
102031616         CDS       T03755                                 
Symbol
PPP4R1
Name
(RefSeq) protein phosphatase 4 regulatory subunit 1
  KO
K15424  serine/threonine-protein phosphatase 4 regulatory subunit 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gfr01009]
    102031616 (PPP4R1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102031616 (PPP4R1)
Protein phosphatases and associated proteins [BR:gfr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     102031616 (PPP4R1)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     102031616 (PPP4R1)
SSDB
Motif
Pfam: HEAT HEAT_2 HEAT_EF3_N Cnd1 TOR1L1_N WRNPLPNID Htt_N-HEAT_1
Other DBs
NCBI-GeneID: 102031616
NCBI-ProteinID: XP_005423404
LinkDB
Position
Un
AA seq 1013 aa
MVQKAKREWLNHQGQHMQAHGILEVAKRTMSQDYSRGSRNLPPQVTPRRRRQEFLRPRYP
VWKGPHGDHGEEHLRALPPIGVDDYNSESDVIIIPSALDFVSQDEMLTPLGRLDKYAASE
NIFNRQMVARSLLDTLKEVSDDERDCIAVLERISRLADDSEPTVRAELMEQVPHIAMFCQ
ENRPSIPYAFSKYLLPIVVRYLADQNNQVRKTSQAALLVLLEQELIERYDVETKVCPVLI
DLTAPDSNDDVKTEAVAIMCKMASMVGKDITERLVLPRFCEMCCDCRMFHVRKVCAANFG
DICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATSQEVRRTKLSTLFIN
LISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEEDGKNPEGCDSAQESSSEQVRTTE
DGTTDEEHNRTEDLSSHCDDSDDFATKLENVIEDQNTVSNNSKRESDFQTESSFHCTLSS
ESCGEMADENEQSSHCCTTAVQEAGLNSQETSLSEQELYNSFHFWRTPLPEIDIDFELQQ
TSDIKLDREIQELTMPVSPSIPMATRKELEEMIENLEPHIDDPDVKAQVEVLSAALRASS
LHPQDETMASVGKGTDSQTELTINDQQSFKPILGDIVPLIGDTVESMDSTLHYIHNDSDL
STNSSFSPEEERKSKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLG
RQNWHCLKDTYETLASDMQWKVRRTLAFSIHELAVILGDQLTAGDLVPVFNGFLKDLDEV
RIGVLKHLHDFLKLLHVDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILLLDLYSARD
IYDYLRPIAFSLCADKVSSVRWISYKLVSEMVKKLYMASTPTFVIDLMNELVEKFCRCPK
WSGRQTFVFICQTISEDDCLPMDQFAVHLLPHLLHLASDKVPNVRVLLAKTLKQTLLEKE
YFLNSANSHQEAVEQTIMALQMDGDSDVKYFASIHPASTKIADDAMSTASSTY
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggtccagaaagcaaagcgtgaatggttgaaccatcaaggacaacacatgcaggcacat
ggaatcctggaggtggccaagagaacaatgagtcaggattactcaagagggtcacggaac
cttcctccccaggtaaccccacgacgccggcggcaagaatttctccggccccgctacccc
gtctggaagggcccccacggtgaccacggcgaggagcaccttcgggcccttcctccaatt
ggtgtggatgactacaactcagagtctgatgtgattattataccttcagccctggacttt
gtctcacaagatgagatgttgacgcctttgggaagattggacaagtacgctgcaagtgag
aacatatttaacaggcaaatggtggctcgaagtttgctggacactttgaaggaagtcagt
gatgatgagagagattgtattgctgtgttggagagaatcagcagattagctgatgattca
gagccaacagtgcgggcagaactgatggaacaggtgcctcatattgctatgttctgtcaa
gaaaacagaccttcaatcccttatgctttttccaaatacctgctaccaattgtggtgcga
taccttgccgaccagaataaccaggtcagaaaaacaagccaggcagcgttgttagtgctg
ttggagcaagaactcattgagagatacgatgtggagaccaaagtatgccctgtgctgata
gatctgacagctccagacagcaatgatgatgtgaagacagaagctgtggctattatgtgc
aaaatggcctccatggttggaaaggacatcacggaaagacttgtgcttcccaggttctgc
gagatgtgctgtgactgcaggatgtttcatgttcgtaaggtatgtgcagccaattttgga
gatatctgcagtgtggttggacagcaggccactgaagaaatgctgctgccaaggtttttc
cagctctgctctgataatgtgtggggagttaggaaagcctgtgctgagtgcttcatggca
gtttcttgtgcaacatcgcaggaagtccggaggacaaagttgtcgaccctttttattaat
ttgattagtgatccttcacgatgggttcgccaagcagcttttcagtctctggggcctttc
atatcaacttttgctaatccatccagcagtggccagtactttaaggaagaagatggtaaa
aacccagaaggttgtgattctgcacaggagagcagcagtgagcaagtcaggaccacagaa
gatggcacaacagatgaagagcacaacaggacagaggatctgtcttcacattgcgatgat
agtgatgattttgcaacaaaacttgaaaatgtcatagaagatcaaaatacagtgtcaaat
aactccaagagggaaagtgatttccagactgaatcatccttccattgcactttgtcttca
gaatcttgtggggaaatggcagatgagaacgagcaaagttctcattgctgtacaacagct
gtgcaggaggctgggctgaattcacaggaaacctctctttcagagcaggaattatacaac
tctttccatttttggaggactccacttcctgaaatagatattgactttgagcttcagcag
acttctgatataaaactcgatagagaaattcaggaactcactatgccagtgtctccaagc
attcctatggcaacaaggaaagaattagaagaaatgatagaaaatttggaaccccatata
gacgatccagatgttaaagcacaagtggaggtgttgtctgctgcactcagagcatccagt
ttgcatcctcaagacgagacaatggccagtgttggcaagggaacagattcacagactgaa
ctaaccatcaatgaccaacaaagttttaaacctatactgggtgatattgtgcctttaatt
ggtgacactgtcgagagtatggattctacacttcactatattcataatgattcagatttg
agtaccaacagtagtttcagccctgaagaagaaagaaaatccaaagtgcaggatgttgta
cctcaagccttgctggatcagtatctctccatgactgatccgtcccgcgcacaaacagtg
gacaccgagattgccaagcactgcgcctacagcctgcccggcgtggcactgaccctgggc
aggcagaactggcactgcttgaaggacacctacgagactctggcatctgacatgcagtgg
aaggttcggcggacactggcattttccatacatgagcttgctgtcatccttggagatcag
cttacagctggagatttagttcctgtcttcaatggctttttgaaggacctagatgaagtg
aggataggtgtgcttaagcacttgcatgacttcctgaagcttcttcatgttgacaaaaga
cgagagtatctttatcagcttcaggaattcctggtgactgataatagcaggaactggcgt
ttccgtgctgagctggctgagcagctgattttgctcctagacctgtacagtgccagggac
atctatgactacctgcggcctattgctttcagcctctgtgcagacaaagtgtcctctgtc
cgctggatttcctacaagctggttagtgaaatggtgaagaagctgtacatggcttcaacg
ccaaccttcgtgatagacctcatgaatgaacttgttgaaaagttctgtagatgccccaaa
tggtctggtcggcagacttttgtctttatttgccagactatcagtgaagatgactgcctg
cccatggaccagtttgctgtgcatctgttgccacacttactacacttggcatctgacaag
gttccaaatgttcgagtcctgctcgcaaaaacattgaagcaaacccttttagagaaagag
tatttcctgaattctgccaactctcaccaagaagctgtggaacaaacaattatggctctt
caaatggatggtgacagtgatgtcaagtattttgcaagcatccaccctgccagtaccaaa
attgcggatgatgccatgagcactgcttcatcaacttactaa

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