Geospiza fortis (medium ground-finch): 102031662
Help
Entry
102031662 CDS
T03755
Symbol
BOC
Name
(RefSeq) BOC cell adhesion associated, oncogene regulated
KO
K20020
brother of CDO
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102031662 (BOC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
102031662 (BOC)
Cell adhesion molecules [BR:
gfr04515
]
Immunoglobulin superfamily
Other
102031662 (BOC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
ISET-FN3_linker
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
V-set
Fn3_ROS1
C2-set_2
Fn3_VIN3
Ig_4
C1-set
Ig_5
Y_Y_Y
DUF7042
Motif
Other DBs
NCBI-GeneID:
102031662
NCBI-ProteinID:
XP_014162302
LinkDB
All DBs
Position
Un
AA seq
1098 aa
AA seq
DB search
MSPIPCLVLAAASCFAKLSESLQVTVQPASIVQKLGGPVSLGCVVDPPRVNLTWRLNGKE
LAGSDEVLGIHVERGKLIITALNNHTVGRYQCIARVPEGVIASVPAVVTLANLKDFKFDG
QHVIEVDEGNTAVIACDLPESHPKAQVRYSVKQEWLEASRDNYLIMPSGNLQIVNASQED
EGTYKCAAYNPVTQEVKTSVSSERLRVRRSTAEAARIIYPPEAQTIIVTKGQSLILECVA
SGIPPPRVTWAKDGSGVSAYNKTRFLLSNLLIDPTSEEDSGTYSCMADNGVGEAGAAFIF
YNVQVFEPPEVTMELSQQIIPWGQSAKFTCKVRGNPQPSVMWLRNAVPLSGSRRHGLRLS
RRALRLLRVGPEDEGIYQCMAENEVGSAQAMVQLRTAGPGAPLNPGRDAQLDSAQPPTPP
SRDSALKLPLDTAGLPKPGTTLLAASPQCVANKELVTPAEAPIILSSPRTSKTDSYDLVW
RPRPDSRAPILYYVVKHRKQVTNASDSWAVRDVPASQHRLTLTRLDPGSLYEVEMAAHNC
AGKGQTAMVTFRTGRRPKPEIVASKEQQIQRDDPGTSTQSSNQADNSRLSPPEAPDRPTI
SMASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKLGDWVLATSDIPPSRLSVEIPGLEKG
TSYKFRVRALNILGESEPSAASRPYVVSGYSNRVYERPVAGPYITFTDAINETTIMLKWM
YIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDVVEGDRYWHSISHLQPETSYDIKMQCFN
EGGESEFSNVMICETKARKSLGLPGRLPPSPVPPQQRPPLSGGHSGLGTGAMVARSSDLP
YLIVGVVLGSIVLLIVAFIPFCLWRAWSKQKQTIDMGFPGAGLLVSSCQYTMVPLRGISA
PRANGHPFANGQPYASRAHLNGICTSAGVGYASTKPRDYSPDEMPQSHEETNALLQAGVL
QNGSAQQDYQPSRLPSSRTEDNSFLYSLPDDSTHQLLQPQDDCPHLQEHFVGLHHPVIGS
KVGGPSLDARRDTLFHQGSPCCLGLVPVEEVERLDCCQSRGDLHAQNPVITSLGQDLPRH
LNSSPPPLRPLETHPPTS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccatcccttgcctcgtgcttgcggctgccagctgttttgccaaactgagtgaa
tctctgcaggtcacagtgcaacctgcttctattgtccaaaagcttggaggcccagtcagc
ctggggtgtgtggtggaccccccccgagtgaatctcacctggagactgaacgggaaggag
ctggctggatcagacgaggtgctgggtatccatgtggagcgagggaagctcatcatcacg
gctctcaacaaccacaccgtggggcgctaccagtgcattgctcgtgtgcctgaaggagtc
attgccagtgtccctgcagtggtcaccttagctaatctcaaagatttcaagttcgatggc
cagcacgtgatcgaggtggatgaagggaacacagctgtgattgcctgcgacctgcctgaa
agtcaccccaaggctcaggtccgctacagtgtgaagcaggagtggctggaggcctcccga
gacaactatcttattatgccatctggaaaccttcagattgttaatgccagccaggaggat
gaggggacttacaaatgtgctgcctacaaccccgtgacacaggaggtgaaaacttcagtc
tccagtgagaggcttcgtgtgagacgctccacagcggaagcagcccggataatttaccct
cctgaggctcagactatcattgtcaccaagggccagagcctgattctggagtgtgtggcc
agcgggatccccccgccgcgggtcacctgggccaaggatggctctggtgtctccgcctac
aacaagacgcgcttcctgctcagcaacctcctgatcgaccccacaagcgaggaggactcg
ggcacctacagctgcatggctgacaatggcgttggggaggctggggctgcgttcatcttc
tacaacgtgcaggtgtttgaacccccggaggtcaccatggaactatcccagcagatcatt
ccctggggccagagtgccaagttcacgtgcaaggtgcgagggaacccgcagccctcggtg
atgtggctgcgcaacgcggtgccgctgtcgggcagccgccgccacgggctgcggctgtcg
cgccgggcgctgcggctgctccgtgtggggcccgaggacgagggcatctaccagtgcatg
gccgagaacgaggtgggcagcgcccaagccatggtgcagctgaggacagccggcccggga
gctccactcaaccctgggcgagatgcccagctggactcagctcaacctccaacaccacct
tccagggacagcgccttaaagctgcccttggatacagctggactgccaaagcctgggaca
acccttctagcggcatctccacagtgtgtagccaacaaagagctggtgactccagctgaa
gcccccatcatcctcagttctccacggacatccaagacagacagctacgacctggtgtgg
agaccccggcctgacagcagagcccccatcctctattacgtggtgaagcatcgcaagcag
gtcaccaatgcctcggacagctgggctgtgagggatgtcccagcctcgcagcaccgcctg
accctcaccaggctggaccctgggagcctctacgaggtggagatggctgctcacaactgt
gctggcaagggacagacagccatggtgaccttccgcaccggccggcgcccaaaaccagag
attgttgccagcaaagagcagcagatccagagggatgacccaggcacgagcacgcagagc
agtaaccaggccgacaacagccgtctgtcccctccagaagcaccggaccgtccaaccatc
tccatggcctcagagacatctgtgtacgtgacctggatcccccgtgggaatggcgggttc
cccatccagtctttccgcgtggagtataagaaattgaaaaagttgggagactgggtcctg
gccaccagtgacattcctccctctcgcctctctgtggaaatcccaggcctggagaaaggc
acatcctataaattccgtgtccgggcactgaacatcctgggagagagcgagcccagcgca
gcgtctcggccgtatgtggtgtctgggtacagtaaccgcgtctacgagcgccccgtggcc
gggccctacatcaccttcacagacgccatcaacgagaccaccatcatgctcaagtggatg
tacattccagccagcaacaacaacactcccatccatggattttacatctactaccgcccc
actgacagtgacaatgacagtgactacaagaaggacgtggtggaaggagatcggtactgg
cactccatcagccacctgcagccagagacctcgtatgacattaagatgcagtgcttcaat
gagggaggtgaaagtgagttcagcaacgtgatgatctgtgaaaccaaagctcggaagtct
cttggtctgccaggtcgtcttccaccctccccagtgccccctcagcagcgtcccccactc
agtggtgggcacagtggcctggggacaggagccatggtggcccggtccagcgacttgcca
tacttgattgtaggcgttgtgctgggatccatcgtcctcctcattgtggctttcatcccc
ttttgcctttggagagcttggtccaagcagaagcaaaccattgacatgggcttcccagga
gctgggctgctggtgtcatcctgccagtacaccatggtgcctctgagaggcatctctgct
cctcgtgccaatggacatccctttgctaatgggcagccctatgccagcagggcacatctg
aatggcatctgcacctctgcaggagtggggtatgcaagcaccaagccccgagattacagc
cccgatgaaatgccacagtcgcacgaggagaccaacgccttgctgcaggcaggagtgctg
cagaatgggagtgcccagcaagactaccagccctccagattgcccagctccagaacagaa
gacaactctttcctctacagtctcccagatgactccactcaccagcttcttcagccacaa
gatgattgtcctcaccttcaagagcactttgttggcctccatcatccagtgataggaagc
aaagtgggagggcctagcctggatgctcgacgggataccctcttccaccaaggaagcccc
tgctgcttagggctggtgccagttgaagaggtagaaagactagactgctgccagtccaga
ggagatctccatgcccagaatccagtgatcacatctttgggtcaggacctaccaagacat
ctgaacagcagccctccaccactgagacccttagagactcatcctcccaccagctag
DBGET
integrated database retrieval system
