Geospiza fortis (medium ground-finch): 102031672
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Entry
102031672 CDS
T03755
Symbol
ITGB4
Name
(RefSeq) integrin subunit beta 4
KO
K06525
integrin beta 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04382
Cornified envelope formation
gfr04510
Focal adhesion
gfr04512
ECM-receptor interaction
gfr04518
Integrin signaling
gfr04810
Regulation of actin cytoskeleton
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102031672 (ITGB4)
04518 Integrin signaling
102031672 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102031672 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102031672 (ITGB4)
04810 Regulation of actin cytoskeleton
102031672 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102031672 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102031672 (ITGB4)
04515 Cell adhesion molecules [BR:
gfr04515
]
102031672 (ITGB4)
04090 CD molecules [BR:
gfr04090
]
102031672 (ITGB4)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102031672 (ITGB4)
Exosomal proteins of bladder cancer cells
102031672 (ITGB4)
Cell adhesion molecules [BR:
gfr04515
]
Integrins
Integrin beta subunits
102031672 (ITGB4)
CD molecules [BR:
gfr04090
]
Proteins
102031672 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
PSI_integrin
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_TEN
EGF_2
SEA
vWA_SIBA-E
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
102031672
NCBI-ProteinID:
XP_014163930
LinkDB
All DBs
Position
Un
AA seq
1853 aa
AA seq
DB search
MNILHLRWRKEDTHKVRTLSIVVQDNRCVLSRAKSCTECIRVDKDCSFCTDESFEEPRCD
LRENLLRSGCGEASIVFTQGEMRTLKNSSINMSLQRTQVSPQAMYMRLRAGEEMSFYMDV
FQPKESPVDLYILMDFSYSMSDDLDNLKSMGHNLADFLQALTSNYTIGFGKFVDKVSSPQ
TDMRPEKLREPWHNADSPFSFKNVIRLTSNINHFSQELRKERISGNLDAPEGGFDAILQT
AVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSHGTYVYDTKQ
DYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSNIVELLRTA
FERIRSKMDIRADFTPRALKTEFTSPEFEKTESGSFHITRGKVSKFHMHVKALEYVGGQH
VCSLPERDRHGVIHVKPTSLSDSLTVSTAVVCDVCPCEQQQELDSPKCSFHGNFVCGQCI
CHPGWRGDTCDCSPASSPNNEGCVRPGDAEPCSGRGECLCGKCQCYSEGQSLRFDGAFCE
FDVLQCPRTSGFLCNDRGRCSRGACVCESGWEGPGCECPTSNDTCIDSRGGICNNHGRCE
CGRCICDMASLYTSSTCEISYSLGFQAVCESIRDCVRCQTWGTGNLKGNCSSCHLQIQMV
EELKKEEAGEHCSFQDEDDDCTYHYTLEGDPNVLPNTTVRVQKNKECPPGTFLWLIPLLI
FLILLLGLLLLVCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSSEHLDTPLV
RSGSLQGRDTVRWRIHNNVHRQGIASPAASSPRELVPYGLSLRLARLFTQNLMKPDTREF
EQLRKEVEENLNEVFKHIPGCHKVQQTKFRLQPNSGKRQDHTIVDTVLTAPYSAKPDIIK
AVEKHVSHEAFNDLKVAPGYYTVTSDQDAQGMVEFQEAVELVDVRVPLFIRDDDDDEKQL
QVEAIEVPNGIAKIGRRVVNITIIKEQGEGLITFLQPAYSHSRFDKLAKIPVLREIIDNG
KSQVTYRTRDLTAKNGRDYLFTEGELVFQPGETRKEVQVPLLELTEIDTLLNSCQLKQFA
IDLLHPKYGAKIGRYPQTTVTIADPELVDGVPSMTGLAQVPQSPKGRLSAPLNPDARALS
SREISFNWFPPPGKPLGYKVKYWMQGDPESEAHLIDVKTPSAELTNLYPFSDYEMQVCAY
NTVGEGTYSDIIRCRTLEEVPSEPGRLAFNVVSSTVTQLSWGEPAETNGVITAYEVSYGP
VNEDNVPIGPLKKVLVEDPKKRVVLIENLRESQPYRYMVKARNGAGWGPQREATINLATQ
PKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSTDVLRSPAGSKRPSVSDDSGSRWKFVPLL
GEDLDLRRITWRLPPETIPRLSGSSRLSSDTEGLLPEEDSAVAPGTVRRSGTPRPQAEHL
MNGRVDFSFPGSGSGTLTRTANTSYHQLSSHMHQEHRVMGSSSLTRDYSTMLMGHDYPGT
LLPPIHEDAGRTLRPRDVGFRSRAKVKGYYPSIGCRDSIIMTDGSTGMCKFIDSRKPLGI
PDTPTRLVFSALGPTSLKVSWQEPRCDKEVQGYSVQYQLLSGGEVHRITIPNPSQNSVVV
EDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGTPFTLSTPCAPGPL
VFTALSPDSLHLSWERPREPNGPILGYRITCEMLHGGGEPRTIYVEGDNLETTLTVPHLS
ENVPYKFKVQANTTQGFGPEREGLITIESQDRGAFSQFGGQQYMREVYKFPTDYTTKTSI
SHSSLDPHFTDGMLVTTQHVESSSSTLTQEFVSHTVMASGTLSQQVERQFYEA
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctccatctcaggtggagaaaggaggacacccacaaagtcaggacactgagc
attgtggtgcaagacaatcgctgtgtgctgtcccgggcaaagagctgcaccgagtgcatc
cgggtggacaaggactgctccttctgcaccgacgagagcttcgaggagccgcgctgtgac
cttcgggagaacctgctgcgctctggctgcggcgaggccagcatcgtgttcacccaggga
gagatgaggacactgaagaattccagcatcaacatgtccctgcagaggacccaggtgtcc
ccccaggccatgtacatgcggctgcgggctggtgaggagatgagcttctacatggatgtc
ttccagcccaaggagagccctgtggatctctacatcctcatggacttctcctactccatg
tctgatgatctggacaacctcaaaagcatggggcataacctagcggacttcctgcaagcc
ctgacttccaattacaccattggatttggcaagtttgtggacaaagtctcatcccctcag
acagacatgagacctgaaaagctgcgcgagccctggcacaacgcagactccccgttctcc
ttcaagaacgtcatccgcctgaccagcaacatcaaccacttcagccaggagctgcgcaag
gagcgcatctccggcaacctggacgcccccgagggcggcttcgatgccatcctgcagaca
gctgtgtgcaaggacaagattggctggagaaaggacagcactcacctgctcgtgttctcc
accgagtctgcctttcactatgaagctgatggtaccaacgtcctggcagggatcctggcg
aggaacgacgagcagtgtcacctggacagccacggcacctacgtgtatgacaccaagcag
gactatccttcagtgcccaccctcgtgcgcctcttgggccagcacaacatcatccccatc
ttcgctgtcaccaaccactcctacagctactacgagaagctgcacaagtatttccccatc
tctgagatcggggtgctccaggaagactcttccaacattgtggagttgctccgcacagcc
tttgagcgcatccgctccaagatggacatccgggctgacttcacccccagagccctgaaa
acagagttcacctccccggaatttgaaaagacagaatctggctccttccacatcacccgt
ggaaaagtgagcaagttccacatgcacgtgaaggctctggagtacgttggagggcagcac
gtctgcagcctccccgagagggaccggcacggagtcatccacgtgaaacccacgtccctg
agcgacagcctcacggtgtcaactgctgtcgtctgcgacgtgtgtccctgtgagcagcaa
caagagttggactcgcccaagtgtagcttccacgggaactttgtgtgcggacagtgcatc
tgccacccgggctggcgaggggacacctgcgactgctccccggcgtcctcccccaacaac
gaaggctgcgtccggcccggggacgcggagccgtgctcgggcaggggcgagtgcctgtgc
gggaagtgccagtgctactccgagggacagagcctgcgcttcgacggcgccttctgcgag
ttcgacgtcctgcagtgcccgcgcacctccggcttcctctgcaacgatcgtggccgctgc
tccaggggcgcctgcgtgtgcgagagcggctgggagggcccgggctgtgaatgccccacc
agcaacgacacctgcatcgacagccgggggggcatctgcaataaccatggccggtgtgag
tgtggcaggtgcatctgtgacatggcttcgctgtacaccagctccacctgtgaaatcagc
tactccctgggcttccaggccgtgtgtgagagcatccgggactgtgtgcgctgccagacc
tggggcacaggcaacctgaaagggaactgcagctcctgccacctccagatccagatggtg
gaggagctgaagaaagaggaggctggtgagcactgctccttccaggatgaggatgatgac
tgcacctaccactacacgctggagggagaccccaatgtcctccccaacaccaccgtccgt
gtgcagaagaataaagagtgcccgcctgggaccttcctctggctcatcccactgctcatc
ttcctcatcctgctcctggggctgctgctcctggtctgctggaagttctgtgcctgctgc
aaggcttgcctggccctgcttccctgctgtgcacgaggtcgcacggttggcttcaaggag
gaccactacatgctgcggcacagcctcatgtcctccgagcacctggacacgcccctggtg
cgcagcggctccctccagggccgggacacggtgcgctggaggatccacaacaatgtccac
aggcagggcatcgcctcccccgccgccagcagccccagggagctcgttccctatgggctg
tccctgaggctggcccggctcttcacgcagaacctgatgaaaccggacacgcgggagttc
gagcagctgcgcaaggaagtggaggagaatctgaacgaggttttcaagcacattcctggc
tgccacaaggtccagcagaccaagttcaggttacagcctaattctgggaaaaggcaggat
cacaccattgtggacacagtgctcactgccccttactcagccaagccagacatcatcaaa
gctgtggaaaaacacgtttcccacgaggccttcaatgacctgaaggttgcaccgggttat
tacactgtgacctcagaccaagatgctcagggaatggtggagttccaagaggccgtggag
ctggtggacgtccgtgtcccgctcttcatcagggacgatgatgatgatgagaagcagctg
caggtggaggccatcgaggtccccaatggcatcgcaaagattgggcgcagggttgtcaac
atcaccatcatcaaagagcaaggtgagggcctcatcacgttcctgcagccagcctattcc
cacagccgctttgacaagctggccaagatccctgtcctcagggagatcatagacaacggg
aaatcccaggtcacctacaggacccgggatctcaccgccaagaacggcagggactacctc
ttcacggagggtgagctggtgttccagcctggggagacccgaaaggaggtgcaggtgccc
ttgctggagctgacagagatagacaccctcctcaacagctgccagctcaagcaatttgct
atcgacctcctccaccccaagtacggcgccaagattggtcgctacccccagaccacggtg
accattgctgacccagagctggtggatggtgtcccctcgatgactggcctggcccaggtc
ccccagtcccccaaaggccgcctgagtgcaccactgaatcctgatgcccgtgccctcagc
tccagggaaatcagcttcaactggtttcctccaccaggaaaacccctggggtacaaggtg
aaatactggatgcagggagaccctgagtcagaagcccatctcattgatgtcaaaacccca
tcagcagagctcaccaacctttaccccttctctgactatgagatgcaagtctgtgcctac
aacaccgtgggagaagggacttactcagacatcatccgctgccgcacgctggaggaggtg
cccagcgagcccgggcgcttggctttcaacgtcgtgtcttccaccgtgacccagctgagc
tggggtgagcctgcagagaccaacggggtgatcacagcctatgaagtcagctatggcccc
gtcaatgaggacaatgtgcccattgggcccctgaagaaggtgctggtggaagaccccaag
aagcgcgtggtgctgatcgagaacctgcgcgagtcgcagccctaccgctacatggtgaag
gccaggaacggcgcgggctgggggccacagagagaagccaccatcaacctcgccacgcag
cccaagcgccccatgtccatccccatcatccctgatgtccccatcattgatgcggaggga
ggtgaggactatgacagctacctgatgtacagcacagacgtgctccgctctccagccggc
agcaagaggcccagtgtctctgatgattcaggctccaggtggaaatttgtgccgttgctg
ggggaagacctggaccttcgccgcatcacctggaggctgccacccgaaaccattccccgc
ctctcaggcagcagccgcctctcctcggacaccgaggggctcctccccgaggaggacagc
gctgtggctcctggcactgtgaggaggagcgggacgccccggccccaagcagagcacttg
atgaatggccgggtggacttctccttccccggcagtggcagtggcaccctgaccaggaca
gccaacaccagttaccaccagctgagctcccacatgcaccaggagcacagggtgatgggc
agctcctcgctgacaagagactactccacgatgctgatggggcacgattacccagggaca
ctcctccctcccatccatgaagatgctgggaggacactccggccccgggacgtgggtttc
aggagcagggcaaaggtgaagggttactaccccagcattggctgtcgggactctataatc
atgactgatgggtccacagggatgtgcaagttcatagactccaggaagcccctgggcatc
cctgacacccccacccgcctggtgttctctgccctgggccccacgtcgctgaaggtgagc
tggcaggagccacgctgcgacaaggaggtgcagggctacagcgtgcagtaccagctcctg
agcggaggagaggtgcacaggatcaccatccccaaccccagccagaactcggtggtggtg
gaggacctgctgcccaaccactcctacatcttcaaggtgaaggcgcagagcgaggagggc
tggggccccgagagggagggagtcatcaccatcgagtcccaggtggacccgcagagcccg
ctcagccccgtgccaggtacccccttcaccctgagcaccccctgtgcccctggacccctg
gttttcactgccctcagcccggattctctgcacctcagctgggagaggccccgcgagccc
aacgggcccatcctgggctacaggatcacctgtgagatgctgcatggaggaggggagccc
aggacaatctatgtcgaaggagacaacctggaaaccaccctgactgtgccccacctgagt
gagaatgtcccatacaagttcaaagtgcaagccaacaccacccaaggcttcgggccagag
agagaaggcctcatcaccattgaatctcaggacagaggtgctttctcccagtttggagga
cagcagtacatgagagaagtttacaaattccccactgactacaccaccaaaaccagcatc
agccactcctctctggatccccacttcacagacgggatgctggtgaccacccagcacgtg
gagagctccagcagcacgctgacccaggagtttgtgagccacacggtgatggccagcggg
accctcagccagcaggtggagaggcagttctacgaggcctga
DBGET
integrated database retrieval system
