Geospiza fortis (medium ground-finch): 102031718 Help Entry 102031718         CDS       T03755                                  Symbol EDC4 Name (RefSeq) enhancer of mRNA decapping 4   KO K12616   enhancer of mRNA-decapping protein 4 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr03018   RNA degradation Brite KEGG Orthology (KO) [BR:gfr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     102031718 (EDC4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gfr03019]     102031718 (EDC4) Messenger RNA biogenesis [BR:gfr03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      102031718 (EDC4)   mRNA degradation factors    5'-3' decay     Decapping complex      102031718 (EDC4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ge1_WD40 EDC4_C WD40 WD40_WDHD1_1st Beta-prop_EDC4L Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_Prp19 WD40_CDC20-Fz WDR55 RnlA-toxin_DBD Motif Other DBs NCBI-GeneID:  102031718 NCBI-ProteinID:  XP_014163223 UniProt:  A0A6I9Z7I9 LinkDB All DBs Position Un AA seq 1365 aa AA seqDB search MCEGSVNENQRPSNSYNGDLNGLLVPDPLGSGDGAALAKPVHRSISLGALQEKQVICLSG DDSSTCLVISAKDVEVVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSY LAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVW RLAMDKEKIQEEILVNIKRPDNTPLNTFRRIIWCPFIPDDNEESGEEGSQTLALLHEDRA EVWDLDIIRTNNSSWPVEVPDIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFW QIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGAEQNRELKMWC TVSWTCLQTVRFSPDIFSSMNILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGK AYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEETDNLSVEGAQGSGAVESAAGV LIKLFCVHTKALQDVQIRFQPLHSPDTSASMPAHGSHEEFAFPDHMADLGTEGLGSEKES VHGSQPDLRRIADLPVPADFLSLSSDAKPKLMTPDAFMTPSTSLQQIAVSPGSSVSSLTA VTAMSSTSVTDASLPRASEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLPDKL TPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETL QRSFAAAAPALPGEGLEPGHHADSMASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRL NAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDEVEEKHKSSSYHRHS YHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASAQRLPVKDWKVKASPRASPKLKR KGKKDDGDMNQSPRSSNNQVTAEFQEEVMCILRSQQRELSELRQTQMELLQRLTDHLDAI QSSLMGHMERVIDSQQEQEQRRLERVLLEGQQRNGQLQEQLSQQLSQSLSTAVCNRLERT IREEMKKTVPQCISKSMDPTVSQLSNTIATKLTAVEGTLKENITKLVKSKNLTDSVVRAT ADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLEAHLKNKKVR EQEVREPLLGQRXXXIAAGVHAELQHQLHLIVGNMQESILAQVQRVIKGEVSLAMKEQQA AVTSSIVQAMRSAAGTPIPSTHMDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYV CETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEDAVMHLDQSDPITRD HMGSVMNQVRQKLFQFLQVEPHNPLSKPARRLMIMLQGLVTPGMT NT seq 4098 nt NT seq  +upstreamnt  +downstreamnt atgtgtgaaggttcggtgaatgagaaccagaggccgtcgaattcgtacaacggggacctg aatgggctgctggtgcctgacccccttgggagtggagatggagctgctctggccaagcca gtgcatcgcagcatctccctaggagccctgcaggagaaacaagtcatctgcctttctggt gatgacagctccacctgcttagtgatatcagcaaaagacgtggaggtggtggccagcagt gattccagcatcaccagcaaggccagagggagtaacaaggtgaaaatacagcctgttgct agatatgactgggagcagaagtactactatggcaatctgatagctgtctcaaactcttac ctggcttatgccattagagctgccagcaatggctctgccatggtgcgggtgttgagcgtc agcactgctgagcggaccttgctgaagggattcacaggaggtgtggcagacctggccttt gctcacctcaactccaaccagctggcctgcctggacgaggctggcaacctttttgtctgg cgcctggccatggataaagaaaaaatccaagaggagatcttggttaacatcaagcgacct gacaacacccccctgaacaccttccggagaatcatctggtgccccttcatccccgatgac aacgaggagagcggcgaggagggcagccagaccctggcattgctgcatgaggacagggca gaggtttgggacttggacatcatccgaaccaacaacagctcctggccagtggaagtgcct gatatcaaagaaggcttcattgtggtgaaaggccacagcacgtgcctgagcgagggagca ctttctccagatggaactgtgttggccacagcaagccatgatggttttgtaaaattctgg cagatctatattgagggacaggatgagccaaggtgtcttcatgagtggaaaccccatgat ggtagacctctttcctgcctgctcttttgtgacaaccataaaaaacaagatccagaagtt cccttctggaggtttctcatcacaggagccgaacagaacagagaactgaagatgtggtgc acggtgtcttggacctgtctgcagactgttcgcttttctcctgacatcttcagctccatg aatattcttcccagcctgaaagtctgcctggacctctcagctgagtatctgatactgagt gatgtgcagagaaaagtcttgtatgtgatggagttgatgcagaaccaggaggagggcaag gcttacttcagctccatctcagagttcctcctgacccacccagtgctgagctttggcatc caggccgtgagccgctgccggctgcggcacaccgaggtgctcccggcagaggaggaaact gacaacttgagtgtagaaggtgctcagggctctggggctgttgaatcagcagcaggtgtg ctgataaaactcttctgtgttcacaccaaggccctacaggatgtgcagatcagattccag cctcttcatagccctgacacaagtgcttccatgcctgcccatggctctcatgaagaattt gcctttccagaccacatggctgatctgggcacggaggggctgggctctgagaaggagtct gtgcatggctcccagccggacctgcggcgcatcgcggacctgcccgtgccagcagacttc ctctccctctccagtgatgccaaacccaagctgatgactccagatgcattcatgacacca agtacttctcttcaacagatcgctgtctctccaggcagcagtgtcagttccctgaccgca gtcacagccatgagcagcacttctgtcacggatgcctctctgcccagagcttcagaagac ttgactgtgagccccaagatgcagctggacaccagcctcacactgagcagcagcagcagc agtctccagaccagtcccaggagtcactctgttcttatcccaggcctccctgacaagctt acaccaaaggcacctgttccagtggcaccaggaaactcctctctagcactggaactgcag gaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgctccccagatgtc atttcctctgcttccacagccatgtcccaggatatcccagagattgcttccgagaccctg cagcgcagcttcgcggcggcggcgcccgcgctgcccggggaggggctggagcccgggcac cacgcagacagcatggcctcagctgcctctgccctgcacctgctgtctcccaggaaccgc cacaactctgagcacagccaccactctttggacatgcctccagtggaggtggacagactg aatgctccatcattactggagactgctttaactcaggaaaatgcatcttctgacagtgtt gtgagtcagccgtggccggcggctcctgacataacccgggaaaccaggaacagcatggca gacagcccaagggatgaggttgaagaaaagcacaagagttcttcctaccatcgacacagc taccaccttctgcagcatgacagccaggatgccagtgcagagcaaagtgaccacgatgat gaagttgcaagcttggcttccacgtcaggtggatttggtgccaaggcatcagcacagagg ctgcctgtgaaggactggaaagtcaaggcatccccccgggcctccccaaagctgaagagg aagggcaagaaggatgatggggacatgaaccagtcaccaagatcatctaacaaccaggtg acagcagagttccaggaggaggtgatgtgcatcctgaggagccaacagcgggagctctcc gagctgcggcagacgcagatggagctgctgcagaggctcacggatcacctcgatgccatc cagagctccctcatgggccacatggagagggtcatcgactcccagcaggagcaggagcag agaaggctggagcgggtgctgctggaagggcagcagcgcaacgggcagctccaggagcag ctgtcccagcagctctcacagtcgctgtccacggccgtgtgtaaccgcctggagaggacc atccgcgaggagatgaagaaaacagtgccccagtgcatttccaagagcatggaccctact gtcagccagctcagtaatactattgctaccaagctcactgctgtggaggggacactgaaa gagaatattaccaagctagtgaaatcaaagaaccttacagacagtgttgtgagggccaca gctgacactctgcagggacccatccagtcagcctacagggaggccttccagagcgtcgtg ctgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgacaccttcaag cagggcacacaggaatatatccagcagctggaggctcacttgaagaacaagaaggtgcgg gagcaggaggtgcgggagccgctgctggggcagcggnnnnnnnnnatcgccgccggcgtc cacgccgagctgcagcaccagctccacctcatcgtgggcaacatgcaggagtctattttg gcccaggtgcagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaggca gctgtcacctccagcattgtccaggcaatgcgctcggcagccgggacacccatcccctct actcacatggatttccagtcccagcagactcacatccttcagctgctccagcagggacac ctcaaccaagctttccagcaggctctaacagcagctgatctcaacctggttctctatgtc tgtgagactgtggatactcagcaagtatttggacagcatccatgcccactgtcccagcct gtgctgctctccctcattcagcagctctcctcagatctgggcactcgtacagaactgaag ttgaactacttggaggatgcagtgatgcaccttgaccaaagcgaccccatcacccgcgac cacatggggtcagtcatgaaccaggtgcggcagaagctcttccagttcctccaggtggaa ccccacaaccctctgagcaagcctgcgcgtcgcctcatgatcatgctgcagggcctggtc acccctggcatgacctag

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