Geospiza fortis (medium ground-finch): 102031754 Help Entry 102031754         CDS       T03755                                  Symbol COL2A1 Name (RefSeq) collagen type II alpha 1 chain   KO K19719   collagen type II alpha Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04510   Focal adhesion gfr04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:gfr00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102031754 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102031754 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gfr00536]     102031754 (COL2A1) Glycosaminoglycan binding proteins [BR:gfr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102031754 (COL2A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  102031754 NCBI-ProteinID:  XP_014166787 LinkDB All DBs Position Un AA seq 1040 aa AA seqDB search GHRYSDKDVWKPEPCRICVCDTGTVLCDEIMCEELRDCPSPEIPFGECCPICPTEQPSGW GKIGPRGKIIELGGIKGLSAPKKPPSPQGPAGEQGQRGDRGEKGEKGTPGPRGRDGEPGT PGNPGPPGPPGPPGPPGPPGLGGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPAGPQGAPG PAGEEGKRGARGEPGAAGPLGPPGERVCGAPDLKHRPRSQKPDPDPESRPAWSQGEGQQX PQKWVGGAPVGSGGCIGGVGAGXSTLRGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQ GARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGER GEQGAPGPSGFQGLPGTPGPPGESGKPGDQGVPGEAGAPGLVGPRGDVGEKGPEGAPGKD GARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGAD GQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGNPGPPGPP GSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKAGQRGIVGLPGQRGERGFPGLPGP SGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGADGPPGRDGAAGVKGDRGE TGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGE AGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGM PGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMR ADAAGLSTGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSPGSIPRKNWWSSKAKEKKHV WFGETINGGFHFSYGAEELAPNTANIQMTFLRLLSTEGSQNVTYHCRNSVAYLDEESGSL RKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGRTVIEYRSQKTSRLPIVDIAP MDIGGPEQEFGVDLGPVCFL NT seq 3123 nt NT seq  +upstreamnt  +downstreamnt gggcaccgctacagcgacaaggacgtgtggaagccggagccgtgccggatctgcgtgtgc gacacggggacggtgctgtgcgacgagatcatgtgcgaggagctgcgggactgccccagc cccgagatccccttcggagagtgctgccccatttgccccaccgagcagcccagcggttgg gggaaaatcggccccaggggaaaaatcatcgagctgggggggattaaagggttgagtgcc cccaaaaagcctccctccccccagggccccgcaggtgagcagggacagcgaggggaccgc ggcgagaagggcgagaagggcacccccggcccccggggcagggatggggagcccggaacc ccaggaaaccccggcccccccgggccccccgggccccccgggcccccgggaccccccggc ctcgggggagggaacttcgcggctcagatggctgggggcttcgatgagaaggctggaggg gctcagatgggtgtcatgcagggacccatgggccccgcaggaccccagggtgcccccgga ccggccggggaggaagggaagagaggagcccgcggagaacccggagctgctggacctttg gggccacctggagagagggtctgtggtgccccggacctcaaacaccgaccccgatcccaa aaacctgaccctgacccggagagccggcctgcctggagccagggtgagggacagcagtga ccccaaaaatgggtcgggggggcacctgtggggtccgggggatgcatcgggggtgttggg gctggttaaagcactcttaggggtctcacaggtcgccctggggacgctgggccccaaggc aaagtcggccccacaggtgcccctggcgaggacggacgtcccggaccccccggcccccag ggggctcggggccaacctggtgttatgggattccctggtcccaaaggtgccaatggcgag cctggaaaagctggtgaaaaaggacttcctggagcaccggggctgaggggacttcctggc aaggacggagagaccggagccgccggacccccaggacctgctggcccggcaggggagagg ggagagcaaggagcccccggcccctccggcttccagggactgccagggacaccgggtccc cccggcgagagtggcaagcccggagaccagggcgttcctggagaagctggagcccccggg ctcgtgggtcccaggggagacgttggagagaaaggacctgagggagcccccggaaaggac ggagctcgcggtctgaccggtcccattggcccccctggccccgctggccccaacggtgag aagggcgagtctggcccccccggcccgtccggagccgccggagcccgtggtgcccccgga gagcgcggagagcccggagcccccggccctgctggattcgccggacccccgggtgctgat ggccagcccggagccaagggcgagcagggcgagcctggccagaagggtgacgccggagcc cccgggcctcagggtccctccggggctcctggaccgcagggtcccacaggtgtcaccggt cccaaaggagcccggggcgctcagggacccccgggtaaccccggacccccaggaccgccc ggctccgcgggcaaggacggccccaagggcgcgcggggcgacgcgggacccccgggccga gcgggggacccggggctgcagggccccgccggccctcccggcgagaaggcaggccagcgc ggcatcgtggggctgccggggcagcgcggcgagcgcggcttcccggggctgcccggaccc tcgggagagcccggaaaacagggagcacctggatctgctggtgaccggggaccccccggg cctgtgggaccccctgggctgactggaccagccggagagcctggaagggagggaaatccc ggcgctgatggacccccgggcagggatggggcggcaggagtgaagggcgatcgtggtgag accggccccgtgggcgctcccggcgctcccggcgctcccggcgctcccggccccgtggga cccactggaaaacagggagacaggggagagacgggtgctcagggtcccatgggtccctct ggccctgctggcgcccgggggatgccgggtccccaggggccgcgcggtgacaaaggcgag gcgggcgaggctggagagcgcggcctgaaggggcaccggggcttcaccgggctccagggg ctgcccgggccccccggtccttctggagaccagggcgctgccggacctgcgggtccctcc gggcccaggggtccccccggcccagtgggcccctcaggcaaggacggctccaatgggatg cccggacccatcggcccccctggaccccggggcaggagcggcgagcccggcccggcgggc ccgcccgggaaccccggcccgcccggcccccctgggccccccggcaccggtatcgacatg tcggcgttcgcggggctggggcagcccgagaagggccccgaccccgggcgctacatgcgg gcggacgcggcgggtctgtccacaggtgattactggattgaccccaaccagggctgcacc ctggacgccatcaaggttttctgcaacatggccacgggggagacgtgcgtgtaccccagc cccggcagcatccccaggaagaactggtggagcagcaaggccaaggagaagaagcacgtc tggttcggcgagaccatcaacggcggcttccacttcagctacggcgctgaggagctggcg cccaacacggccaacatccagatgaccttcctgaggctgctgtccaccgagggctcccag aacgtcacctaccactgccgcaacagcgtggcctacctggacgaggagtcgggcagcctg aggaaggcgctgctcatccagggctccaacgacgtcgagatccgcgccgagggcaacagc aggttcacctacagcgtgctggaggacggctgcacgaaacacacggggaagtggggcagg actgtcatcgagtaccgctcgcagaagacctcgcgcctgcccatcgtggacattgcacct atggacattgggggacctgagcaggagtttggggtcgacctcggccccgtctgcttcttg taa

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