Geospiza fortis (medium ground-finch): 102031986
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Entry
102031986 CDS
T03755
Symbol
PSEN1
Name
(RefSeq) presenilin 1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04310
Wnt signaling pathway
gfr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102031986 (PSEN1)
04330 Notch signaling pathway
102031986 (PSEN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102031986 (PSEN1)
Peptidases and inhibitors [BR:
gfr01002
]
Aspartic peptidases
Family A22: presenilin family
102031986 (PSEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
DUF6559
DUF5523
Motif
Other DBs
NCBI-GeneID:
102031986
NCBI-ProteinID:
XP_005417614
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All DBs
Position
Un
AA seq
480 aa
AA seq
DB search
MTELSAHLPQFQHGQLTENFPDTHLSNTQESMASALFNTDQNDNSERRRHDNSERRRNDN
AESETNGQPQNNIQRVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFY
TRKDGQLIYTPFTEETETVGQRALNSILNAAIMISVIIVMTILLVVLYKYRCYKVIHGWL
IISSLLLLFFFSFIYLGEVFKTYNVAMDYITVALMIWNFGVVGMICIHWKGPLRLQQAYL
IMISALMALVFIKYLPEWTAWLILAVISVYDLIAVLCPKGPLRMLVETAQERNETLFPAL
IYSSTMIWLVNMAEEDPEAQRKSKNSAFDKQAPASRAQNEDAEADDGGFSQEWQQQRDNR
IGPIESTPESRAAVQALPSNSQTSEDPEERGVKLGLGDFIFYSVLVGKASATASGDWNTT
LACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDNLVQPFMDQLAFHQFYI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctgtctgcgcatttaccccagtttcagcatgggcagctgacagaaaacttc
cctgatacccacctcagcaacacccaagagtccatggcctctgctctgtttaatactgat
cagaatgacaacagtgaaagacgtcgccatgataatagtgagcgcagaagaaatgacaat
gccgagtctgagaccaatgggcagccacaaaacaacattcagcgggtggtggagcaagat
gaagaagaagatgaagagctaacactgaaatatggggcaaaacatgtgattatgctgttt
gtgcctgtcacgctttgcatggtggttgttgttgcaactatcaagtctgtcagcttttat
acacgcaaggatggacagctcatctacactcctttcacagaagagacagagacagtagga
cagagagccctgaattctattcttaacgcagccatcatgatcagtgttatcatcgtcatg
accatcctcctggttgtgctttacaaatacaggtgctacaaggtgatccatggttggctt
atcatttcttctcttttgctgcttttctttttctcattcatctatctgggagaggttttt
aagacatataacgttgccatggactacattacagtggcactgatgatctggaactttggt
gttgtgggaatgatttgtatccattggaagggtcctcttcggctccagcaggcatatctc
attatgatcagtgctctcatggccttggtgttcattaagtaccttcctgaatggactgca
tggcttatcctggctgtcatttcagtgtatgatttgattgctgtcctgtgtcctaaaggt
cctcttcgtatgttagttgaaacagctcaagagagaaatgaaactctctttccagcactt
atttactcctcaacaatgatatggcttgtgaacatggctgaggaagatccagaagcccaa
cggaagtccaaaaactctgcttttgataaacaagctccagcaagccgggcccagaatgaa
gatgctgaagcagatgatggtggctttagtcaggagtggcagcaacagagggacaacaga
ataggacccattgaatcaacacctgagtcacgtgctgcggttcaggctctacccagtaac
tctcaaacaagtgaagaccctgaagaacgaggagtaaagctcggtttgggagacttcatt
ttctacagtgtcctcgttggcaaagcctctgcaacagcaagtggggactggaatacaact
ttagcatgttttgtagccatattaattggtttgtgccttacacttctgcttcttgccatc
tttaagaaggccttgccagctcttccaatctccataacctttgggctagttttttacttt
gcaacagataacttggtgcaaccgttcatggaccagctagcattccatcaattttatatc
tag
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