Geospiza fortis (medium ground-finch): 102032047
Help
Entry
102032047 CDS
T03755
Symbol
CHRNA5
Name
(RefSeq) cholinergic receptor nicotinic alpha 5 subunit
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102032047 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102032047 (CHRNA5)
Ion channels [BR:
gfr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102032047 (CHRNA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102032047
NCBI-ProteinID:
XP_005419831
LinkDB
All DBs
Position
Un
AA seq
511 aa
AA seq
DB search
MIKSGPKRDGKILDRLQECPPAFSGTDFPYVQHLFLWPGCWAGRRIPAVAVGAEWSGLVA
NADVHCSFESMLIFFLITAVSEPSFIAKSEDRLFKHLFEDYQRWVRPVERLNDTIKIKFG
LAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYD
NADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQ
VDLILEDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPFVTYSFIIRRLPLFYTLFL
IIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYL
VFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHVDRYFAQK
EETANVNGSESSRNTLEAALDSIRYITRHVMKENEVREVVEDWKYIAQVLDRMFLWAFLL
VSIIGSLVLFIPVIHKWASIIVPTHIGSTNA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagtggtccaaagagagatggcaaaatcctggatcggttacaggaatgtcct
cctgccttcagcgggacagattttccctacgtgcagcaccttttcctgtggcctggctgt
tgggcagggaggaggatcccagctgtggctgtgggagctgagtggagcgggctggtggca
aatgcagatgtacactgctcatttgaatcaatgttaattttttttttaattacagctgta
tctgaaccttcttttattgctaaaagtgaagatcgtttatttaagcatttatttgaagac
tatcaaagatgggttcgtccagtggaacgtttgaatgacacaataaaaatcaagtttggc
cttgcaatctctcagctagtagatgtggatgaaaaaaatcaattgatgacaacaaatgta
tggttgaaacaggaatggatagatgtaaaattgaggtggaatcctgaggactatgcagga
ataacatctatccgtgtcccatcagattctatttggattccagatattgtgctgtatgac
aatgcagatggacgttttgagggaacatctacaaaaactgtggtaaaatatgatggcacc
attgcttggactccaccagcaaactacaaaagttcttgtactattgatgtaacattcttc
ccctttgaccttcaaaattgctcaatgaaatttggttcctggacttatgatggctcacag
gttgatctaattcttgaagattatgatgttgacaaaagagatttttttgataatggagaa
tgggaaatagtgactgcaacagggagcaaaggaaacaggactgatggatgctgctggtat
ccttttgttacatattcatttataattagacggttgccacttttttacactttgtttctc
attattccttgtattgggctttcatttctaactgttcttgtcttctatcttccttcaaat
gaaggtgaaaagatttcactctgcacttcagtactggtatctttgactgtttttcttctt
gttattgaagaaattattccatcatcttctaaagttatccctctcataggagagtacctg
gtgttcacgatgatatttgtgaccttgtccattgtgatcactgtctttgccatcaacatc
caccaccgctcctcgtccacacacaacgccatggcgccctgggttcgcaagatattcctg
cacaagctgcccaagctgctctgcatgagaagccatgtggataggtactttgctcagaag
gaggaaacagccaatgtgaatggatcagaatcatccaggaacaccttggaagcagctctg
gattccatccgttatattacgaggcacgtgatgaaggagaatgaggtccgtgaggttgtt
gaagactggaaatacattgctcaggtgcttgatcgaatgttcttatgggcttttcttctg
gtttcaataattggatcacttgtgttatttattcctgttattcataaatgggcaagtata
atagtccctacccatataggcagtacaaatgcataa
DBGET
integrated database retrieval system
