KEGG   Geospiza fortis (medium ground-finch): 102032085
Entry
102032085         CDS       T03755                                 
Symbol
KDM4B
Name
(RefSeq) lysine demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gfr03036]
    102032085 (KDM4B)
Enzymes [BR:gfr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102032085 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102032085 (KDM4B)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102032085 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_3 DUF4537
Other DBs
NCBI-GeneID: 102032085
NCBI-ProteinID: XP_005429534
UniProt: A0A6I9HSC6
LinkDB
Position
Un
AA seq 1090 aa
MGSENPSPQNPGCKIMTFRPSLEEFRDFGRFIAFMESQGAHRAGLAKVIPPKEWKPRRTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDSAVLDHMKPTALSSPELDAWNE
TKAELKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERSKGMEGEGECKAKARPPKAKGERKKKQLFPPQPPGPVPGPIPAPQLPP
EAGPGPARPPGPSTAPGPEQARPTAPLNVVQPSEAPAEEDDFRPRPIIPMLYVVPRSKKV
VFDKEHMSCQQAFEQFATQKGLGWRQQGPGKEQDGAEAERAELAAEAASAFSKMKMEIKK
SRRHPLGKPPTRSPLSVVKQETSSDEEMFPFSGEEDMSDPEALKSLLSFQWKNKALNFPA
ERKFNAAAALSEPYCAVCTLFYPYNQSSQVEKEAAPASTGEPSSFVHLSKCGQKTKPLIP
EMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNEGWSCSRCS
AGAWAAECCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIPEQRWK
LRCVYCRKRMKKVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKAA
NQNVPFRREVALGQTVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNVYPESIISR
DCIQMGPPPEGELVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEE
LPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQTPDYLAFMESLLQTQ
YQPGTQSNMF
NT seq 3273 nt   +upstreamnt  +downstreamnt
atggggtcggaaaaccccagcccgcagaaccctggctgtaagatcatgaccttccggccc
tcgctggaggagttccgcgacttcgggaggttcatcgccttcatggagtcccagggagcc
cacagggcaggcctggccaaggtgatcccccccaaggagtggaagccacggcgcacctac
gatgacattgatgacatggtgatcccagctcccatccagcaggtggtcacgggccagtca
gggctcttcacccagtacaacatccagaagaagcccatgaccgtgggcgagtaccggcgc
ctggccaacagcgagaagtactgcacccctcggcaccaggattttgaggacctggagcgc
aagtactggaagaacctcacctttgtgtcccccatctatggggctgacatcagtggctcc
ctgtatgatgcagacgtggatgagtggaacattggcaacctgaacaccctcctggacatg
gtggagcacgagtgtggcatcatcatcgagggggtgaacactccctacctctactttggc
atgtggaagacaacttttgcttggcatacagaggacatggatctctacagcatcaactac
ttgcattttggggagcccaaatcctggtatgccattcccccggagcacggcaagaggctg
gaacgcctggcaaaaggattcttcccaggaagctctcagggatgtgatgctttcctccgt
cacaagatgaccctcatttctccctccatcctgaagaaatatgggattccctttgacagg
atcacccaggaggctggggagttcatgatcacatttccctatgggtaccacgctggcttc
aatcacggcttcaactgcgccgagtccaccaacttcgccaccctgcgctggatcgactac
ggcaagatggcaacacagtgcacgtgccgcaaggacatggtgaagatctccatggacgtg
tttgtcagggtgctgcagccagaacgctacgagctctggaagcagggcaaggacagtgca
gtgctggaccacatgaagcccacggccctgagcagccccgagctcgacgcctggaacgag
accaaggcagagctgaaggcaaagctgctgcgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaaggagtcaacccagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccttggaagatgtgaaagtaaaagaggag
ctgaaaagggggccagatctggaggaagaggagagaagcaaagggatggagggagaaggg
gagtgcaaggccaaggcgcggcccccgaaggccaagggcgagcgcaagaagaagcagctg
tttccccctcagcccccggggcctgtcccagggcccattccagccccccagctgccccct
gaggctgggccaggcccagcacggcccccgggaccctccacagccccgggcccggagcag
gcccggcccacggcccccctgaacgtggtgcagccctcggaggcgccggccgaggaggac
gacttcaggccgcggcccatcatccccatgctgtacgtggtgccccgcagcaagaaggtg
gtgtttgacaaggagcacatgtcctgccagcaggccttcgagcagtttgccacgcagaag
gggctgggctggcgccagcagggccctggcaaggagcaggacggcgctgaggccgagcgc
gccgagctcgccgccgaggctgcttctgccttctccaagatgaagatggagatcaagaag
agccgccggcacccgctgggcaagcccccgacgcgctcgccgctgtccgtggtcaaacag
gagacctcgagtgatgaggaaatgtttccattttctggagaggaagatatgagtgatcca
gaggctttgaaatctttactttccttccagtggaagaacaaagcacttaatttcccagct
gaaaggaagttcaatgcagctgctgccctgagtgagccatactgtgctgtctgcaccctc
ttctacccctataaccagtcctcacaggtggagaaggaagctgccccagcctccacgggg
gagccgtcctcgttcgtgcacctttccaagtgtgggcagaagaccaagcccctgatccca
gagatgtgctttacctcaagtggagagaacaccgagccccttccttcaaattcctacatt
ggagaggatggaaccagtcccttgatatcctgtgccaaatgctgcctgcaggttcatgct
agctgttacgggatacgcccggagctggtgaacgagggctggtcgtgctcgcggtgctcg
gccggcgcctgggcagcggaatgttgcctgtgcaatctcaggggaggagctctccagatg
accactgatggccggtgggtccatgtgatctgtgctatcgctgtccccgaggcgcgtttc
ctcaatgtcatagagcgtcatcctgtggacatcagcgccatccccgagcagaggtggaaa
ctgaggtgtgtgtactgcaggaagaggatgaagaaggtgtctggggcctgtgtgcagtgc
tcctatgagcactgctccacgtccttccacgtgacgtgcgcgcacgcggccggcgtgccc
atggagcccgacgactggccctacgtggtgtccatcacctgcttcaagcacaaagcagca
aaccagaacgtcccgttccgcagggaggtggccctggggcagacagtgatcaccaagaac
aggaacgggctctactatcgctgcagggtcatcggcaccagcacccagaccttctacgag
gtcaacttcgacgacggctcctacagcgacaacgtttaccccgagagcatcattagcagg
gactgcatccagatggggccccctccggagggggagctggtgcagctgcagtggacggac
gggatcatctacaaggccaagttcattgcagcccagatcagtcagatttaccaggtggag
tttgaagatggctctcagctaatggtgaagcgtggggatatttataccttggaggaagag
cttcccaagagagtcaagtctcgcctgtccctcagcactggggcccctcaggaagatgtg
ttttcaggagatgaagtgagagcagccaagcgtccccggctggggaatcccaggaatcct
gaggaatatggacaaaccccagattacctggccttcatggagagcctgttgcagacacag
taccagcctgggactcagagcaacatgttttaa

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