KEGG   Geospiza fortis (medium ground-finch): 102032106
Entry
102032106         CDS       T03755                                 
Symbol
EXOSC2
Name
(RefSeq) exosome component 2
  KO
K03679  exosome complex component RRP4
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102032106 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gfr03019]
    102032106 (EXOSC2)
Messenger RNA biogenesis [BR:gfr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102032106 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     102032106 (EXOSC2)
SSDB
Motif
Pfam: KH_6 RRP4_S1
Other DBs
NCBI-GeneID: 102032106
NCBI-ProteinID: XP_014162600
LinkDB
Position
Un
AA seq 229 aa
MSEPSVSSSQLGRASEDCPQGNTVCEGHPNGGRCSPPRPGLYNGEIGDIVVGRITERRKS
AEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLVKRQKT
HFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRNCIMAL
VTHKIMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLGARQRLLDSEG
NT seq 690 nt   +upstreamnt  +downstreamnt
atgtctgagcccagcgtgagcagcagccagctggggagggcgtcagaggactgccctcag
gggaacaccgtgtgtgaggggcacccgaacggggggcgctgctcgccgcctcggcccggg
ctgtacaacggcgagatcggcgacatcgtggtcggcaggattacggagagaaggaaatcg
gcagaagatgagcttgcaatgagggactacctgcaggaaggggatctcatcagtgcagag
gtccagtctatattttctgatggggctgtatcactgcacacccggagcctgaagtatggg
aagcttgcccagggtgtgctggttcaggtctctccctcccttgtgaaacgccagaagact
catttccatgacctgccctgtggtgcctccgtgatccttggcaacaatggcttcatctgg
atctacccaaccccagagcagaaggatgacgaggctggaggctacactgccaacctggag
ccagttcccttgtctgaccgggaggtgatctcacggctccgaaactgcatcatggctctg
gttactcacaagataatgctctttgacaccagcatcttgtattgctatgaagcatccctt
cctcatcagatcaaggacattctcaaaccagaggtgacagaggagattgttctgggagct
cgacagaggttgctggattcagagggatag

DBGET integrated database retrieval system