Geospiza fortis (medium ground-finch): 102032196
Help
Entry
102032196 CDS
T03755
Symbol
SYNJ1
Name
(RefSeq) synaptojanin 1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00562
Inositol phosphate metabolism
gfr01100
Metabolic pathways
gfr04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
102032196 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
102032196 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102032196 (SYNJ1)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
102032196 (SYNJ1)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
102032196 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
102032196
NCBI-ProteinID:
XP_014166744
LinkDB
All DBs
Position
Un
AA seq
1296 aa
AA seq
DB search
MAFSKGFRVYHKLDPPPFSVMVETRSREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAY
GLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTCTEFVSLRADPTDEDRVSEVR
KVLNSGSFYFAWSATGASLDLSLSAHRSMQEHTTDNRFFWNQSLHLHLQHYGVSCEEWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVN
LLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLE
CGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTR
FQEVFRSMWSVNGDSVSKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLL
LGNTLNSDLADXARALLTTSSLHISEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTW
NVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKNKPVDIFAIGFEEMVELNAGNI
VNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKT
GMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEISRKLGFPMGRMLF
SHDYIFWCGDFNYRIDLPNEEVKELIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINF
APTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHSDTNVPYT
WNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSI
RSSSAEENYFDDNLIDGLLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELQ
GRIININLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSA
EVEEILPQHLQPTSSSGLGTSPSSSPRSSPCQSPTLPEGPALPARPSRAPGKAPGPPVCA
QGGYCMAPAGAQQKEPPPQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEF
GGLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPSAGTARPTVPPRAGVISAPQSHV
RPSGARPAPEAQPKPAEPPRGSPLLPEPLKPQAAGPAQPSPAVLRMQEPLIPVASHPSQA
GAPQSLEPPQPPPRSRSSHSLPSEPAPSQQQEQPSG
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagcaaaggattccgagtctatcacaagctggatccgcctcccttcagcgtg
atggtggagaccaggagcagagaggagtgcctcatgttcgagtccggagccgtggctgtc
ctctcctctgcagaaaaagacacaatcaagaatacctactccaaagtcatggatgcatac
gggctcttgggcgtgttaagattaaacctcggggacacgctgctgcactacctggtgctg
gtgacagggtgcatgtccgtggggaagatccaggactcggaggtgttccgggtgacctgc
acggagttcgtgtcgctgcgcgctgaccccacggacgaggatcgcgtctccgaggtgcgc
aaggtgctcaactcgggcagcttctatttcgcctggtctgccacgggtgccagcttggac
ctgagcctcagcgcccaccgcagcatgcaggagcacaccactgacaacaggttcttctgg
aaccagtccctgcacttgcacctgcagcactacggggtgagctgtgaggagtggctgctg
cggctcatgtgtggaggggtggagatcaggaccatctacgcagctcacaagcaggccaag
gcctgtctgatctcccggctgagctgcgagcgggctggcacccgcttcaatgtccgtggc
accaacgatgacgggcacgtggccaatttcgtggaaacagagcaggtgatatatttggat
gactctgtgtcatctttcatacagattcgaggatctgttccattattttgggaacagcca
ggactgcaggtgggatcccatcgtgtcaggatgtcaaggggctttgaggcgaatgcacca
gcttttgacaggcatttccaaactcttaaaaatttatatggcaagcaaattattgtaaat
ttacttggggcaaaagaaggggagcacatgctcagcaaagccttccagagccatttgaaa
gcatctgaacattcagctgatatcaaaatggtgaacttcgactatcatcagatggttaaa
ggtggaaaggcagagaaactacacagcgtgcttaaacctcaagtccagaaattcttagag
tgtggatttttttattttgatggaaaggaagtgaaaaggtcccagagcggcactgtcagg
accaactgcctggactgcctggacaggaccaacagtgtgcaggccttctttggcttggag
atgctaaccaagcagctggaggtgttgggactggctgagaagcctcagttagtgactcgc
tttcaggaggttttccgatccatgtggtctgtcaatggggattctgtcagtaaaatctat
gctggaactggagcccttgaaggaaaagccaagctgaaggatggtgctcgttctgtgacc
agaaccatccaaaataacttttttgatagctccaagcaggaggccattgatgttttgtta
ttgggaaataccctgaacagtgatttagcagattaagcacgggctctcttaaccaccagc
agtttacacatttcagagcaatcattgcaatcagcatctgtgaaagtgctgaagagcatg
tgtgagaacttctataagtatgccaaacccaaaaagatccgagtgtgcgttggcacgtgg
aacgtcaatggggggaagcagtttcgcagcattgccttcagaaatcaaaccctcactgac
tggctgctggatgcacccaagctagctgggatccatgaattccaagatcgcaaaaacaaa
cctgtggacatatttgccattggatttgaagaaatggtggagttaaatgcaggaaacatt
gtgaacgccagcaccacgaaccagaagctctgggctgctgagctgcagaagaccatctcc
agggattacaagtatgtgctgctggcctcagagcagctggtgggcgtctgcctcttcgtg
ttcatcaggcctcagcacgctccctttatcagggatgttgctgtggatacggtcaagact
ggcatgggaggagccacggggaacaagggggccgtggccattcggatgctgttccacacc
tccagcctctgctttgtgtgcagtcactttgctgcaggccagtcccaagtcaaggagaga
aatgaggactttgtagagatttctcgcaagcttggatttccaatgggaaggatgctcttt
tcccatgactacattttttggtgtggggacttcaattatcgaatagatttgcccaatgag
gaggtgaaggagctgatccgacagcagaactgggatcccctcatagcaggagaccagctg
atcaaccagaaaaactctggacagatttttaggggatttctggaagggaagatcaatttt
gcccccacatacaagtatgacctgttctctgatgactacgacaccagtgagaagtgccgc
acgcccgcgtggacggatcgcatcctctggaggaggaggaaatggccctttgaccgatca
gctgaagacctggatctcctgaatgcgagttttcacagtgacactaatgtcccttacaca
tggaatcctggcactttgctgcactatgggagagcagagctgaaaacatctgatcacagg
cctgtggttgcactgattgacattgacatatttgaaattgaagcagaagagagacaaaaa
gtgtataaggaggtgattgcaatgcaaggtccccctgatggtactgtgatggtctccatc
agaagttcttcagctgaagaaaactattttgatgataacttgattgatggtcttcttcaa
aaattcgcaagctatggcgaagttatacttataaggtttgtggaagacaagatgtgggta
acatttttggaaggaagctctgctctgaatgttatgaatttgaatggtactgagctacaa
ggaaggattataaatatcaacttgaaaaatccagattggatcagaagtttggaagatgaa
atgaatctagagaagattaatattgggctgccttcatccacaagctccactttgctttgt
gaagatgctgaggttactgcagactatgacatggaaggagacatcgatgactacagcgct
gaagtagaggaaatccttccccagcacctgcagccgacgtcgagctccgggctgggcacg
tccccgagctcctccccgcgctccagcccctgccagtccccgacgctgcccgagggaccc
gcgctgccggcgaggcccagccgggccccaggaaaggctcctgggccccctgtgtgcgca
caaggtgggtactgcatggccccagctggtgcccagcagaaggagcctcctccgcagagc
ctggagcccaagcgccctccgccccctcggcccgtggcgcctcctgcccgtccggctccg
ccgcagcgcccgcctcccccctcaggcggtaggagtcctgcacctgctagaaaagaattt
ggaggtcttggagctcctcccagtcctggggtagctaggagagaagtagaagcacaaaaa
agccctggaacacaaagaaaagataacttagttcggaatcagcctccaccctcggcgggt
acggccagaccgactgttcctcctcgagctggagttatcagtgccccacaaagccatgtc
cgtccctcgggggcacgaccagcacccgaggctcagcccaagccagctgaaccaccacgg
ggctcgccgctgcttcctgaaccactgaagcctcaggctgctggccctgcccagcccagc
cccgctgtgctcaggatgcaggagcccctgatccctgtggcatcccatccctctcaggcc
ggtgccccgcagagcctggagcccccgcagccgccgcctcgcagccgctcctctcacagt
ttgccttctgaacctgctccctcccagcagcaagagcaaccgtcagggtaa
DBGET
integrated database retrieval system
