Geospiza fortis (medium ground-finch): 102032258
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Entry
102032258 CDS
T03755
Symbol
RBM22
Name
(RefSeq) RNA binding motif protein 22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102032258 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102032258 (RBM22)
Spliceosome [BR:
gfr03041
]
Complex B
Other components
Prp19-related factors
102032258 (RBM22)
Complex C
102032258 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102032258
NCBI-ProteinID:
XP_005418793
UniProt:
A0A6I9HE87
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All DBs
Position
Un
AA seq
385 aa
AA seq
DB search
MTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQ
VRDAGLSLKDEMPKSDVNKEYYTQNMEREIANSDGTRPVGALGKATSTSDMLLKLARTTP
YYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLK
RASTMPRLDPPEDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA
TRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGAL
PPPPAAEEEASANYFNLPPSGPSAVVNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMR
APGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaaaatatggaaaagaatgcaagatttgtgccaggcccttcacggtgttc
cgctggtgccccggcgtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagc
aagctgaagaatgtctgtcagacctgcctgctcgacctggaatatggtttgcctattcaa
gtccgggatgcaggactctcccttaaggatgaaatgcctaaatctgatgtcaacaaagaa
tactacacccagaacatggagcgagagatagccaattctgatggcaccagaccagttggg
gcactaggaaaagctacttctaccagtgacatgctgctgaagctggcccgaaccactccg
tactacaaacgcaaccgtcctcacatctgttccttctgggtaaaaggagagtgcaagaga
ggagaggagtgtccctacagacatgagaaacctacagatccagatgatcctctggctgac
cagaacatcaaggatcgttactatggaattaatgatcctgtggctgacaaacttctgaaa
cgagcatcaaccatgcctcgtctagaccctcctgaagacaagactattactacactgtat
gttggagggcttggagataccatcactgaatcagatctcagaaatcacttctaccagttt
ggggagatccggacgatcacggtggtgcagaggcagcaatgtgctttcatccagtttgcc
accaggcaggctgcagaggtggctgctgagaaatccttcaacaaactcatcgtcaacggc
cgcaggctcaatgtcaaatggggaaggtcccaggcagcaagaggtaaagaaaaggacaag
gaaggcactacagaatcagggataaagctggagccagttccaggacttcctggagccctc
ccccctcctccagctgcagaagaggaggcttctgcaaattacttcaatctacctccaagt
ggcccttcagccgtggtgaacattgccctgccacctcctcctggcatcgctccaccgccg
cctccaggttttggaccacacatgttccacgccatggggcccccacctcccttcatgaga
gccccaggccccatccactacccatcccaggacccccagaggatgggtgcccacgcagga
aagcacagcagcccctag
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