KEGG   Geospiza fortis (medium ground-finch): 102032268
Entry
102032268         CDS       T03755                                 
Symbol
PRDM12
Name
(RefSeq) PR/SET domain 12
  KO
K24255  PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gfr03036]
    102032268 (PRDM12)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102032268 (PRDM12)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 SET zf-C2H2 zf-C2H2_4 zf-C2H2_7th_ZNF462 zf-C2H2_15 zf-C2H2_jaz zf-Di19 CBM_3 Zn_ribbon_Elf1 zf-C2H2_6 zf-BED
Other DBs
NCBI-GeneID: 102032268
NCBI-ProteinID: XP_005421454
LinkDB
Position
Un
AA seq 312 aa
MSRIRRPPQPRLTPGIALSSPRPPALPAPLVGAFPGAEVQKLSSLVLPSEVIIAQSSIPG
EGLGIFSKTWIKAGTEMGPFTGRVISPEHVDLCKNNNLMWEVFNEDGTVRYFIDASQEDH
RSWMTYIKCARNEQEQNLEVVQIGNSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPG
LEEEQKKNKHGQXGVSRAPSTPGLPPPRAFTSRSNLRSHMRIHTLDKPFVCRFCNRRFSQ
SSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPNPSLQPHSPALPVPHP
ASLAHHIPTMVL
NT seq 939 nt   +upstreamnt  +downstreamnt
atgtcaaggatccgccggccccctcagcccaggctcaccccgggcatcgccttgtcctcg
cctcgtcctcctgcactgcctgctccgctggtgggagcgttcccgggcgcagaggtgcag
aagctctccagcctggtgctgccgtcggaagtgatcatcgcccagagctccatccccggg
gaagggctcggcatcttctccaagacctggatcaaggctggcactgagatggggccgttc
acgggcagggtcatctcccccgaacatgtggacctgtgcaagaacaacaacctcatgtgg
gaggtcttcaacgaggatggcactgtgcggtacttcatcgacgccagccaggaggatcac
cgcagctggatgacctacatcaaatgtgcacggaacgagcaggagcagaacctcgaggtg
gtccagatcgggaacagcatcttctacaaggccattgagatgattcctccagaccaagag
ctgctggtctggtatgggaactcccacaacaccttcctgggcatcccaggtgtgccaggg
ctggaagaggagcagaagaagaacaaacatgggcagtgaggagtttccagagcacccagc
accccaggcctcccccccccccgcgccttcacctcccgcagcaacctgcgctcccacatg
cgcatccacaccctggacaagcccttcgtgtgccgcttctgcaaccgccgcttcagccag
tcctccacactccgcaaccacgtccgcttgcacacaggcgagcggccctacaagtgccag
gtttgccaaagtgcctattcccagctcgcggggctgcgggcgcaccagaaaagcgcccgc
caccggccccccaacccctccctgcagccccactcacctgccctgcccgtgccccaccct
gcctccctggcccatcacatccccaccatggtgctgtga

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