Geospiza fortis (medium ground-finch): 102032276
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Entry
102032276 CDS
T03755
Symbol
MYSM1
Name
(RefSeq) Myb like, SWIRM and MPN domains 1
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102032276 (MYSM1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102032276 (MYSM1)
Peptidases and inhibitors [BR:
gfr01002
]
Metallo peptidases
Family M67
102032276 (MYSM1)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
102032276 (MYSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
JAB
Prok-JAB
Myb_DNA-binding_2
Myb_DNA-bind_6
UPF0172
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
102032276
NCBI-ProteinID:
XP_005423067
LinkDB
All DBs
Position
Un
AA seq
827 aa
AA seq
DB search
METHPDALSYEEVFEVLHEAVQSSRDHENTASSLLQDHYLDSSWRTGNSLPWTLDSSISE
ENRAVIEKMLLEEEYYLSNKSLSEKIWLNQKEVEKRSTKSPHKKTGKVMVRSPTKSPGCS
LKWTSEEKELFEQGLVKFGRRWTKIAKLIGTRTVLQVKSYARQYFRNKAKNGDSEKEEQS
QCGSSLPMEDGAGMEAGNLRGRADPNLNAVKIEKLSDDEEVDITDDMDEILTPAFQQETG
KSELSVIPKSPVEETKAAEQGGFSSAGHSSATALPKEDPQHTRPETVDALVFPAVAATCS
QHLNGDKSVNLDYQQYNNLVEKAEQSGPVTCPVQGTDQELSEEQRDLADNGLLFPSPCQG
DEDHQEEAEELKPPDQEVEVDRSIILEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQWE
RCKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQPADRSRCRE
GKDTVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELARRREEEKLK
PAKSSKGSRQMKSSFDPFQLIPCCLFTEEKQEPFQVKVSSEALLIMDLHSHVSLAEVIGL
LGGKYSEADKIVEVRAAEPCNSLSTGLQCEMDPVSQTQASESLAARGFQVIGWYHSHPAF
EPSPSIRDIDTQAKYQSYFSRGGAMFIGMIISPYNRNNPLPYSQITCLVISDEISSDGSY
RLPYKFEMEQMLEEPQWELVFEKTRWIIEKYRFCHSSVPMDKIFHRDSDLTCLQKLLECM
RKTLGKVTNCLIAEEFLTQIENLFLSTYKSEKDAEGSENERSQELPV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagactcatcctgatgctttatcctatgaagaggtgtttgaagtgctgcatgaagca
gttcagagcagtagagatcatgaaaacacagcatcaagcctgctgcaggatcactatctt
gattcatcttggagaactggcaacagtcttccctggacgttggacagcagcattagtgaa
gaaaacagggctgtcattgagaagatgttgctggaagaagaatattatttatctaataaa
tcactttctgaaaaaatatggctcaaccaaaaggaagtggagaaaagatctacgaaaagc
ccgcataagaaaactggaaaagtcatggtgcgttcgcctacaaaatcacctggctgttcc
ttgaagtggacatcagaggaaaaagagctgtttgaacaaggactggtgaaatttggccgc
aggtggacgaaaattgccaaactgatcggcactcgaacggtgctgcaagtcaagagctat
gctcggcagtacttcaggaacaaggcaaaaaatggtgattcagaaaaagaagagcaaagt
cagtgtgggagcagccttcccatggaagatggggcaggaatggaagctggaaacttgaga
ggccgtgcagaccccaacctgaacgcggtgaaaatcgagaagctgtcagatgatgaggaa
gtggacataactgatgacatggatgaaatactcactcctgccttccagcaagaaacagga
aaatctgaattatctgttatcccaaaaagtccagttgaagaaacaaaagcagcggaacaa
ggaggtttttcatctgctggccacagttctgcaactgctttgcctaaagaagatcctcag
cacaccaggccagagacagtggatgcgttggtatttcctgctgtggcagcaacgtgttcc
cagcacctgaatggggataaatcagtgaatttggattaccagcagtacaacaatcttgtt
gagaaagctgagcaaagtggaccagtcacatgtcctgtgcaaggaaccgatcaggagctc
agtgaggagcaaagagacctggctgataatggattgctttttccttctccctgccaaggg
gatgaagatcatcaagaggaagcagaggagctgaagccacctgatcaagaagtggaggtt
gacagaagcatcattctggaagaagagaagcaggctattcctgaattctttgaagggcgc
caggccaaaacaccagagcgttatttgaaaatcaggaattatattttggatcagtgggag
agatgcaaacccaaatacctgaacaagacctcggtgcggcccggcctgaagaactgcggg
gacgtgaactgcatcgggcggatccacacctacctggagctgataggagccatcaacttc
ggctgtgaacaggccgtgtacaaccggccccagcccgccgacaggagccgctgcagggag
ggcaaggacacggtggaagcctatcagctggcccagcgcctgcagtccatgcgcacgaga
agacggcgagtgcgggacccgtggggaaactggtgtgatgcaaaggatttggaaggacag
acatttgagcatctctcagctgaggaattagcaagaaggagagaggaagaaaaactgaaa
cctgcaaaatcttctaaaggttcaagacaaatgaaaagttcctttgatccctttcagctg
ataccatgctgtttgttcacggaagaaaagcaggagccctttcaggtgaaagtgtcttct
gaagcacttttaataatggatttgcactctcacgtgtctctggcagaagtgattgggctg
cttggtggaaagtactctgaagctgataaaattgtggaagtgcgtgcggcagagccgtgt
aacagcctgagcacaggcctgcagtgtgagatggaccccgtgtcccagacccaggcctcg
gagtcgctggcagcccggggcttccaggtgatcggctggtaccactcccaccccgccttc
gagcccagcccctccatccgcgacatcgacacgcaggccaagtaccagagctatttctcc
aggggtggtgccatgttcatcgggatgatcataagcccttacaacaggaataatcctctt
ccctattcccagatcacctgtctggtcattagtgatgagatcagttctgatggttcctat
cgcctgccctacaaatttgaaatggaacagatgttggaggagcctcagtgggaattagta
tttgaaaaaacaaggtggataattgagaaatacagattttgccacagcagcgtccccatg
gataaaatttttcatagagattctgacctgacttgtttgcagaaacttttggagtgcatg
aggaagactttgggcaaggtaacaaactgcctcattgctgaagagttcttgactcagata
gaaaacttattcctttccacatacaagagtgaaaaagatgctgaaggaagcgagaatgaa
cgttcacaagaattgccagtgtga
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