Geospiza fortis (medium ground-finch): 102032304
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Entry
102032304 CDS
T03755
Symbol
ARAP1
Name
(RefSeq) ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102032304 (ARAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102032304 (ARAP1)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
102032304 (ARAP1)
Endosome - Golgi transport
Arf GTPase associated proteins
102032304 (ARAP1)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
102032304 (ARAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
RA
PH_8
PH_3
PH_6
SAM_1
PH_13
SOS1_NGEF_PH
SAM_2
PH_2
DUF1033
Motif
Other DBs
NCBI-GeneID:
102032304
NCBI-ProteinID:
XP_005429786
LinkDB
All DBs
Position
Un
AA seq
1405 aa
AA seq
DB search
MEEEGSLPVAAWLSAVHLDQYVESFQQSGLWSVWDCRALTDEGLIRLGVLLPGHRRRSPG
PRRQCRKCRGEKLRSPPASPGPPRGADRSREGIERCRRYRVRLSPCRVFPALACEPQALL
VPAAPGLQGTLPRNSIPVKEEVPITERAASVTLSSPLPPPRSKAPAPTPPALPSKASLPF
VPEFDDSDYEDSAWEEELARPTGEMAKVGPTVGLEEDAELISLFSEDEFGEDQPSASPAS
GGSSWSDREPSLPLPAPNAFPGSSPGTLRDSMEGTSATSLLSPTIREGWLDKNPPQGSYI
YQRRWVKLDTDYLRYFDSEKDTYSKRLIPVSSISRVSSVGDQKFEVVTNNRNFVFRAEND
ADRNEWIRTLQQIAEERKSKVAVRTSMSLATDSATELADKSGFLELRGFKHKLFVVVAGD
KVFLYKNAEDYRLGIGITYIEMNVGNVKEVDRRGFDLTTPYRIFSFSADSEQEKEEWVEA
MQQSITEALSNSEVAERIWAVESNRFCADCGSPKPDWASINLCVVICKRCAGEHRGLGPG
ITKVRSLKMDRRVWTEELIELFQRFGNIMANQFWAANVPPSEAISPTSGSQERRRFLIAK
YREGKYRHYHPLFGNQEELDRALCAAVTTSDLAETQALLFCGASVTCDTGDPQCPTPLAL
AERSGQRLQMEFLLHNKTSEPPRLEMVCSEEKPYSVPLPSITHNGFLYKTPSMVKPISER
KGPEXFSRRWLTLQDGMLSYYENDRNTVPNGEIRVEEIVCLVNNPLHAHGIESTFEVYTE
ADRLYLFGLESPASAREWLKSIAKSFVHPCAEELLALDFERLGRLHYKGGLTLERAQEGW
FALVGSTLHVCSEDGRRQEPLQLRKLQELSIQGDHEVLVLVERRRTLYIQGERKLDFLGW
VHAIQKAASSSGDTLSEQQLTESDVPLLVDRCIDYITQCGLTSEGIYRKSGQNSKTTSLL
EVLQRDARCVRLKEGEHHVDDVANTLKRFFRDLGDGLFTRRWAPNWLWATALEDEGAKVG
EYRQLLAALPPVNRATLKALINHLFRVQCFSGENQMNTHNLAIVFGPTLFQTDGKDYKAG
RVVEDLISHYVEIFNVNDQEMKKQQDEITAIMKMREASSSGTQQAGDFICTVYLEEKKTE
TEQHVKIPATMTAEELTFEILDRRKIVMKEKDYWSCFEVNEREEAERPLHYSEKVLPILH
CLGTESYLVVKKQMSMEHMLIYLASRVGDCKHGMMKFREERNLLGLGLSTGFHDRYFILN
RSWLRLYKEVRLRQPWAGSPTSSHKPEKEWPVRNLKVYLGVKKKLRPPTCWGFTVFYENE
KHEKQQWYLCCDTQADLREWFATFLQVQNGGALWPSERPRARVARPQQDARLGNISLIPL
RGNESEMRNSVAAFATDPLTLLRNV
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagggatctctgccggtggccgcctggctgtctgccgtccacctcgaccag
tatgtggagagcttccagcaaagcgggctgtggtccgtgtgggactgccgggctctgacg
gacgaggggctcatccgccttggggtgctgctgcccggccaccgccgccggagcccgggc
ccccgccgccagtgcaggaagtgccggggtgagaagctgcgctccccgccggcctccccc
ggccctccccgcggtgccgatcggtcccgggaggggatcgagcgctgccggcgctaccgg
gtgcgcctctcgccgtgccgggtgtttcctgcgctggcctgtgagccacaggcactgctg
gttcctgctgccccgggactccagggcaccctgccgcggaacagcatccctgtgaaggag
gaggtgcccatcactgagagagcagccagcgtcaccctgtcctccccgctgcccccgccc
cgctccaaggcgccagcaccgacgccacccgcgctgccctccaaggccagccttcccttc
gtgccagagtttgatgactcagactacgaggactcggcgtgggaggaggaattagccaga
ccgacgggggagatggccaaggttggtcccaccgtggggctggaggaggatgctgagctc
atcagcctcttcagtgaagatgagtttggtgaggaccagcccagtgcatcccctgccagt
ggtggcagcagctggagtgacagggagcccagcctgcccctgcccgcacccaacgccttc
cctggcagcagccccggcacactcagggacagcatggagggcaccagtgccaccagcctg
ctgtcacccaccatcagagaagggtggctggacaagaacccgccacaggggtcctacatc
taccagaggcgctgggtgaagcttgacactgactacctccgctattttgacagtgaaaag
gatacctactccaagcggctcatccccgtctcctccatctcccgcgtctccagtgttggg
gaccagaaatttgaggttgtcaccaacaaccgcaactttgtgttccgggctgagaatgat
gcagaccgcaacgagtggatacggaccctgcagcagattgcagaggagcggaagagcaaa
gttgcagtgaggacatcgatgtccttagccactgacagtgccactgagctagctgataag
agtggcttcctggagctgcggggctttaagcacaagctctttgtggtggtggctggggac
aaagtgttcctttacaagaatgcagaggactatcggctggggattggcatcacctacatt
gagatgaatgtggggaacgtcaaggaggtggatcgccggggctttgacctcaccacacca
tacaggatcttcagcttctctgctgactcggagcaggagaaggaggagtgggtggaggcc
atgcagcagtccatcactgaggcactctccaactcggaggtggccgagaggatctgggcg
gtggagtccaaccgtttctgtgccgactgcggctcccccaaacccgactgggcctccatc
aacctctgtgttgtcatctgcaagagatgtgcaggggaacaccggggattgggccctggc
atcaccaaagtccggagcttgaagatggataggagggtgtggactgaggagctgatcgag
ctcttccagcggtttggcaacataatggccaaccagttttgggctgcaaatgtgcctccc
agtgaggccatcagccccaccagcggcagccaggagaggaggcgcttcctcatcgccaaa
taccgggagggcaagtaccgtcactaccacccactcttcggcaaccaggaggagctcgac
agggctctgtgtgcggccgtcaccaccagtgacctggcagagacgcaggctctgctcttc
tgtggggcatcggtgacctgtgacaccggggacccccagtgcccaacgcccctggccctg
gctgagaggagcgggcagcggctgcagatggagttcctgctgcacaacaaaacctcagag
ccgccgcgcctggagatggtgtgcagtgaggagaagccctactctgtacccctgccctcc
atcacccacaatggcttcctctacaagaccccctccatggtcaagcccatcagtgagcgc
aagggcccagaannnttcagcaggcggtggctcacgctgcaggatggcatgctcagctac
tatgagaacgaccgtaacactgtacccaatggcgagatcagggtggaggagattgtctgc
ctggtgaacaacccactccatgcccatgggatcgagagcacgtttgaggtgtacacggag
gcagatcgactctacctctttgggctggagagccctgcctctgctcgagagtggctcaag
tctattgccaagtcctttgtccacccctgtgccgaggagctgctagcactagactttgag
cggcttggccgtctgcattacaaagggggtctcaccctggagcgtgcccaggagggctgg
tttgccctggttggctccactctccatgtctgctcagaggatggccgtcggcaggagcct
ctccagctgcgcaagctgcaggagctctccatccagggggaccacgaggttctggtgttg
gtggagaggcggaggacgctgtacatccaaggggagcggaagctagatttcctgggctgg
gtccatgccatccagaaggctgcgagcagctcgggagacaccttgtcggagcagcagctg
acggagtcggacgtcccactgctggtggaccgctgcatcgactacatcactcagtgcggg
ctgacatctgagggaatctaccgcaagagcggacagaactccaagaccaccagcctgcta
gaagtgctgcagcgggatgcacgctgtgtccgcctgaaagagggcgagcaccatgtggat
gatgttgccaacaccctcaaacgcttcttccgtgaccttggggatgggctcttcactcgg
cggtgggccccaaactggctgtgggcaacagcactggaggatgagggggcaaaggttggc
gagtaccggcagctcttggctgccctccctccggtgaaccgggccactctgaaggcgctc
atcaatcacctcttccgggtccagtgcttctctggggagaaccagatgaacacacacaac
ctggccattgtctttgggcccacactcttccagacggacgggaaggactacaaggcagga
cgtgtggtggaggacctcatcagtcactacgtggagatctttaacgtcaatgaccaagag
atgaagaagcagcaggatgaaatcacagccatcatgaagatgcgggaggcatcgtccagc
ggaacacagcaagctggggacttcatctgtactgtctacctggaggagaagaagacagag
acagagcagcatgtcaagatcccagccacaatgacggctgaggagctcacctttgagatc
ctggaccggcggaaaattgtcatgaaggagaaggactactggagctgctttgaagtgaat
gagagggaagaggcagagcggcccttgcattactcggagaaagttctgcccatcctgcac
tgcctgggcacagagagttacctggtggtgaagaagcagatgtccatggagcacatgctc
atctaccttgccagcagagtgggtgactgcaagcatggcatgatgaaattccgggaggag
aggaacctgctggggcttgggctgagcactggcttccatgatcgctacttcatcctcaac
cgctcctggctgcgcctctacaaagaagtgcggctcaggcagccatgggcagggtccccc
acctctagtcacaagccagagaaggagtggcctgtccgaaacctgaaggtctacctgggc
gttaaaaagaagctccgacccccgacgtgctggggttttacagtattctacgaaaacgag
aagcatgagaagcagcaatggtacctgtgctgtgacacccaggccgacctgcgggagtgg
tttgccaccttccttcaggtgcagaacgggggtgccctgtggccctcggagcgtcccagg
gcgcgggtggcgcggccgcagcaggatgccaggttgggtaacatctccctcatcccgctg
cggggcaatgagagcgagatgaggaacagtgtggctgcttttgctactgaccctctaact
cttctgcggaacgtctga
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