Geospiza fortis (medium ground-finch): 102032461
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Entry
102032461 CDS
T03755
Symbol
MBD4
Name
(RefSeq) methyl-CpG binding domain 4, DNA glycosylase
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102032461 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102032461 (MBD4)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102032461 (MBD4)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102032461 (MBD4)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102032461 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102032461
NCBI-ProteinID:
XP_005426695
UniProt:
A0A6I9HQT0
LinkDB
All DBs
Position
Un
AA seq
260 aa
AA seq
DB search
MSRARLRPVAGSQRELAHLPKEGPCSSDTPAVGSEDKSYGLETGPVPDPGALGGQSVQPD
TEVDAEPWHRTSFAAVTTSPEESVPRTQVERRRTSPYFSSKYSKEALSPPRRKALRKWTP
PRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMS
ELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQD
HKLNVYHTWLWENRKKLSID
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggcacggctcaggccagtggctggctcacagagggagctggctcacctgcca
aaggaggggccatgctccagtgacacacctgctgtgggctctgaggacaaatcctatgga
ctggagacagggccagtgccagatccgggggctctgggcgggcagagtgttcagcctgac
accgaggtggatgctgagccgtggcacaggaccagctttgcagcagtcacaacgtctcca
gaagagtctgtcccacgaacacaagtggagagaaggagaacgagtccctatttttccagt
aaatacagcaaagaagccctcagcccacccagaaggaaggccctcagaaaatggactcct
ccacgttctcctttcaatcttatccaggaaacactcttccatgatccatggaagcttctc
attgccaccatatttctcaacaaaacttcagggaaaatggccattccagtgctctgggag
ttcctgaagaagtatccttctcctgaggtagccagggctgcagactggaaagaaatgtca
gagctgctcaaacctctgggcctctacgaactcagagccaaaaccatcatcaggttctca
ggtgagtacctgagcaaggcgtggcggtacccgatcgagctgcacggcatcggcaagtac
ggcaacgactcctacaggatcttctgtgttaacgagtggaaggaggtacagccacaggac
cacaagttgaacgtgtaccacacgtggctgtgggagaaccggaagaagctgagcatcgac
tga
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integrated database retrieval system
