Geospiza fortis (medium ground-finch): 102032515
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Entry
102032515 CDS
T03755
Symbol
CHD2
Name
(RefSeq) chromodomain helicase DNA binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102032515 (CHD2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102032515 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
102032515
NCBI-ProteinID:
XP_014164554
UniProt:
A0A6I9ZBW4
LinkDB
All DBs
Position
Un
AA seq
1829 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRRQKQLKRKIKWKREVSAGEEDEDGGEQGTSGESEPEPKKIKARRPVQR
RTVAKTGVKKPHKIQRGKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYVTEANGNPSANFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKTSSNDPEYLCKWMGLPY
AECSWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENL
ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL
STLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKD
KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMS
ALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLET
LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIK
GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNP
FNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFK
VANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPAEGKG
PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVDW
GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLL
KKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKED
GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKDKKEKPKGAEAKSGSKGKRS
QGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEH
TRNCLLKIGDRISECLKAYTDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHP
RDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGERRSR
GDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSEDFRPQNYHQQ
DFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPSHPPVSDPRSPPSQKSPHDS
KSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagtgag
cagggcagcgagtcaaacagcagctccgagtcctctgagagtcagtctgaatccgaaagt
gaatcaacgggttccaaatcccagcagacccctcctgaaaccaaagaaaaaccagcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggca
agtagcgagtctgaaaatgagagcccaaaaagaagacgccagaagcagttgaaaagaaaa
attaaatggaaaagagaagtgtctgctggagaagaggatgaagatggaggggagcaaggc
accagtggagagagtgagcctgaaccgaagaaaattaaagcaagaagacctgtccagagg
agaacagtggccaaaactggtgttaaaaagccacacaaaatccagcgtgggaagaggaag
aaaccagactcgtctgaagatgatgatgatgatgaagacgatgagacccccaagagacaa
actcggcgaagagcagccaaaaacgtcagctacaaagaggatgatgatttcgagacggat
tctgatgacctgatagagatgactggggaaggagctgatgaacaacaagacaacagtgaa
actattgagaaagtcttggacatcaggcttggaaaaaagggagccatcggagcttccacc
accgtgtacgtgactgaggccaacggcaaccccagcgccaacttcgaccccgagaaggac
gagggggaggttcagtacctgatcaagtggaagggctggtcatacatccacagcacgtgg
gagagtgaggagtccctgcagcagcagaaagtgaagggcctgaaaaagctggagaacttc
aagaagaaagaggaggagatcaagcaatggttgggcaaggtatcacctgaagatgtagaa
tatttcaactgccaacaagagctggcttcagagctaaacaaacagtatcaaatagtggag
agggtaatagctgtgaagaccagcaagtctgccacgggacattcagatttcccagcaaac
agtcgcaaaacatcctcgaatgaccccgaatacctgtgcaagtggatggggctgccctat
gctgagtgcagctgggaagatgaggctctgatcagcaagaaattccagcactgcattgac
agcttcaacagcaggaacaactccaagaccattcccacccgtgactgcaaggtgttgaag
cagaggccgaggtttgttgccttgaagaagcagccctcgtacatcggcggggagaacctg
gagctgcgcgattaccagctggagggcctcaactggctggctcactcctggtgcaagaac
aacagcgtgatcctggctgatgaaatgggactgggcaagaccattcagacaatatcattc
ctgtcatacctgttccatcagcaccagctctatggccctttcctggtggtcgtgcccctg
tccaccctcacctcctggcagagggagtttgaagtgtgggcacccgagataaacgtggtg
gtttacattggagacctcatgagcaggaacatgatacgtgaatatgagtggatccattct
cagtctaaaagattgaaattcaatgcacttatcacaacatatgagatccttctgaaggat
aagactgttttgggaagcattaactgggcctttctgggcgtggacgaagcccatcggttg
aaaaacgacgactccttgctgtacaaaaccttgattgatttcaagtccaaccacaggctg
ctgatcactggcaccccacttcagaactcactcaaggagctctggtccctgctgcacttc
atcatgccagagaagtttgagttctgggaggattttgaggaggatcacgggaaaggaaga
gagaatggctaccagagccttcacaaagtcctggagccgttcctgctgcgcagggtgaag
aaggatgtggagaaatctctgccagccaaagtggagcagatcctccgggtggaaatgtct
gctctgcagaagcagtactacaagtggattttgacaagaaactacaaagctctttcaaag
ggaacaaggggaagcacatctggtttcctgaatattgtgatggaattgaaaaagtgctgc
aaccattgctaccttatcaaacctcctgaggaaaatgagagagagaatggccttgagacc
ctgcagtctttgatcaggagcagtggaaagctgattctcttggacaagctgctgacgagg
ctgcgcgagagaggcaacagagtgctgatcttctcccagatggtgaggatgctggacatc
ttggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcgatcaag
ggggagatccgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttctgt
ttcttgttgtcaacaagagctggagggttgggaattaatttggcctctgctgacactgtt
gttatctttgactcggactggaacccccagaatgatcttcaggctcaggcccgagcccat
cggattggacaaaagaagcaggtgaacatttaccgcctggtcaccaagggtacagtggag
gaggagatcattgagagagccaagaagaaaatggtgctggatcatttggttatccagcgt
atggacaccactggcaggactgttctggacaacaactctgggagatccaactcaaatccc
ttcaacaaagaggagctgacagctattttgaagtttggagctgaagatcttttcaaggag
cttgaaggagaagagtcagagcctcaggagatggacatcgatgagattctgcgtctggct
gaaacccgggagaatgaggtgtccaccagtgccaccgacgagctgctctcacagttcaag
gttgccaactttgcaaccatggaggaggaagagacagagctggatgagcggtcccagaag
gactgggatgatatcattccagaagagcagaggaaaaaggtggaggaggaagaaaggcag
aaggaattggaggaaatctacatgctgcctcgaatccggagctcaacaaaaaaggctcag
acaaatgacagtgaatctgatgcagagaccaagagaaggcttcagagatcatctgggtca
gaaagcgagactgacgacaccgacgacgagaagagacccaagcgcaggggacgccctcgg
agtgtcagaaaagacactgtggaaggatttactgatgctgaaatcaggaggtttatcaag
gcttacaagaagtttggattgcctcttgaaaggctggagtgcattgcccgggatgctgag
ctggtggacaagtctgtggctgacctgaagcgtttgggagagctcatccacaacagctgt
gtgtcagcaatgcaggaatatgaggagcagctgaaggaaaatccagcagaagggaaagga
cctggaaagagacgaggtcccaccatcaagatttctggtgtccaggtcaatgtgaaatcc
atcatccagcacgaggaggagtttgaaatgctgcacaaatccattccctcggacccagag
gaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgctcactttgatgtagactgg
ggagtggaggaggattctcgcttgttagtggggatttacgagcatggctatggaaactgg
gagctgattaaaacagacccggagctgaagttgtctgataagatcctgccagttgagaca
gataagaaacctcagggaaaacagctccagacccgagttgattatctactgaaactgctg
aaaaaagatctggacaagaaagaaaacatgaaagatggggaagagggcaagctaaagaag
aggaaaccacgagtgaagaaagagaacaaggctcccaaagtcaaagatgagcatgggaat
gaactctcctctcctcggcactcagacaaccagtcagaagagggtgaagtcaaggaggat
ggcttggacaagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaataag
gaaaaacagacatcctctaagaaagaaaaggaaagcgataaagagaaaaagaagacaaaa
gacaagaaagagaagcctaaaggtgcagaggccaaatctggaagtaaagggaagagatca
cagggtcctgtccacatcactgcagggagtgagccaatccccattggagaagatgaggat
gatgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtcaaaaaa
gcactgaagcaacttgataagcctgataagggactgacagtccaagaacagctggagcac
acacgcaactgcctcctgaaaatcggtgatcgaatctctgagtgccttaaagcctacact
gaccaggatcacatcaagctgtggagaaggaacctatggatatttgtgtcaaaattcaca
gaatttgatgccagaaaactacacaaactctacaagatggctcataagaaaagatcacag
gaagaggaggagcagaagaagaaggaggacatgtccagcatgaagaagccgttccgccca
gagccctcaggctccagccgcgattccgtgatgtcccagtcccacgtgcctcacaatcct
cactcccagaagatccacatgcccccttcacacacccagcagcagatgcacgggcacccc
cgggacaactatggccacccaaacaagagacatttcagcaacacagaccgaggagactgg
cagagggatcgaaagttcaactacggtggcaacagcaaccagatgtggggcggggagcgg
caccaccagtacgagcagcactggtacaaggaccaccactacggggagcggcggtcgcgg
ggggacccccaccgcagctccggcaactaccgaccaaacaacctgtcccgcaagcggccc
tacgagcagtacaacagcgaccgcgaccaccgcggccaccgcgactactacgacaggcac
caccacgattccaaacgtcggcggtccgaggacttcaggcctcagaactaccaccagcag
gattttaggaggatgtctgaccacaggccacccatgggctaccacggccaaggaccctcg
gaccactaccggtccttccacacagacaaactgggcgattacaaacagcccctccctcca
tctcaccctccggtgtcggaccctcgctcgcccccctctcagaaatccccccacgattct
aagtcacctctcgatcacaggtcacctctggataggtcattggaacagaaaaacaatcca
gattataactggaacattcggaaagcgtaa
DBGET
integrated database retrieval system
