Geospiza fortis (medium ground-finch): 102032577
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Entry
102032577 CDS
T03755
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102032577 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102032577 (RAB11FIP1)
Membrane trafficking [BR:
gfr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102032577 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
RBD-FIP
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
102032577
NCBI-ProteinID:
XP_014166321
LinkDB
All DBs
Position
Un
AA seq
1703 aa
AA seq
DB search
SGAPLGRQWVLGTAISLTVLVTVAGNLLVIVAIAKTPRLQTMTNVFITSLACADLIMGLL
VVPPGATILLSGHWPYGTTVCELWTSLDVLCVTASIETLCAIAVDRYLAITAPLQYEALV
TKGRARAVVCLVWAISAFISFLPIMNHWWRDGADERAARCYEDPRCCDFVTNVTYAIVSS
TISFYVPLLVMIFVYVRVFAVASRHVRLIGKDKVRFVQEAPSPTGRSSRRRRPSRLLAIK
EHKALKTLGIIMGVFTLCWLPFFVANIIKVFCRSLVPDQLFLFLNWLGYINSAFNPIIYC
RSPDFRSAFRKLLCCPRRADRRLHAVSQDLQRCPCAFSPRGGPAGDSKAAPGGPGEDGEA
RGGGSRTEETPRPHRQRPPGESRLQGAQTSLCSQLHDFAGGETPAGPSEAGGAEAAPGVT
VLAGPGEEEEEEEDLPWERWWLRDSTSSFVPWYKLRSKPGKKEKERGEIEVDIQFMRSNM
TASMFDLSMKDKPRSPFGKLKDKLKGKRSSGLSDTASAIVPSTSHSPADSEDEAVEKEKK
KSKFKALFSKPGLHKTSLSQSMSVLPTQQPLTQRVRLRPSDFQAQWDEEESQTSPASERS
FESVPEQKPAPSPLFKSRKPAFLDSRQLTQGTTNHTKKDGLSLFSGLKSKNDPVSKSSLC
INGSHVYMEETTTKDKTPASSPSPHNLRRKQLFASEENLSSRSTKPPEEMGRASPGQPIS
GSTSLETFKSMTLPSYKLLSSEEHLDTSVPPSVEPVRETKKPDQKKSALLSLVTGKKETV
KPSDAEIIPDRTLQSEENTIPEEKSEEEAKCPEAPADLGRGSPSGDAHHAEEAVTTKQLP
SPCEEERKPEKAAAAKTKAVKPRLGLSPEEEPKATLPTLAPDPLPAFLSVHRISSANNPF
ISQVGQMVQVPDSENITGSPASLTSPAFAAELWNDKNPFTAEWDRASRALDPNSIARFPS
SHHPAASVPKVPLPGQVSARGNNPFAADWGQGPEGSEASWGLSGPHTPSVPSVCPFNDSN
PFVSKRGAQAVPGSQAGSSPSCLPAGENCSSAGHPARGASGGSAHVALTSDVTAEPDPLG
TLSDPPGLAAEPHWDSARLQPEGSLESSKPGHGKSVSFVLGEWQGVPSGDASLGGQEGGE
QPLDSSGRSQMSSGAAGERARFGGDPSTELSGDSTHPTWSSDGTAVEVSGGSTEPCTRGD
KGFVSLSKCSDSLVLEAEQAQSPKGELREEQEPCAGKQWAERVPMLEPQAPPPAGNDPVP
QVQPTPRACTGEGDAGRAGREVLVPPKPAPRVAVLLRKPPGTPQADAPAPGDAAESSPGL
PFPEASAAPGCLPQGGSLGTATPAVAPRGKSRPVEKEGAAGLSVCLTNVRSAVPVPGDRG
SALPVIPEGGSDEELLGDCQDSCGASAGDRGVLGNGEQPRGLTPLHGKQRELSDSSAAAP
MIPAAPGGEPGAMPGACEPGSLPVLPAAVRAPRVCVQGADSGLGVTSHSRVCESHAEKQE
LERSAGAEECAECDFSEPSAFSSSLSSPCQPHSSSHSLLSDTPSRRAESPKKPRAEGFAD
KAGNSGKKKLLQARVSPSETFPNHTPWCETVSPQHRLHPVKPMNAMANKPQSKNLNVIST
MNEKLLEMSVKKYDPSDPAYAYAQLTHDELIQLVLKQKDTITRKDVQVRELEDYIDNLLV
RVMEETPNILRVSVSGNKKAGKM
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
agcggggctccactgggccggcagtgggtgctgggcaccgccatcagcctcaccgtgctg
gtcaccgtggccgggaacctgctggtgatcgtggccatcgccaaaacgccgcggctgcag
accatgaccaacgtcttcatcacctcgctggcgtgcgccgacctcatcatgggcttgctg
gtggtgccgccgggcgccaccatcctgctgagcggccactggccctacggcacgacggtg
tgcgagctgtggacctcgctggacgtgctgtgtgtgaccgccagcatcgagacgctgtgc
gccatcgccgtggatcgctacctggccatcaccgccccgctgcagtacgaggcgctggtg
accaagggccgcgcccgggccgtggtgtgcctggtgtgggccatctctgccttcatctcc
ttcctccccatcatgaaccactggtggagggacggggcggacgagcgggcggcgcgctgc
tacgaggacccgcgctgctgcgacttcgtcactaatgtcacctacgccatcgtgtcttcc
accatctccttctacgtgcccctgctcgtcatgatcttcgtctacgtgcgagttttcgcc
gtggcctcgcggcacgtccggctcatcggcaaggacaaggtgaggttcgtgcaggaggcg
cccagccccacgggcaggagcagccggcgcaggaggccctcccgcctgctggccatcaag
gagcacaaggctctcaaaacgctgggcatcatcatgggcgtcttcactctctgctggctg
cccttcttcgtggccaacatcatcaaagtcttctgccgctcgctggtgccggaccagctc
tttctcttcctcaactggctgggctacatcaactcggccttcaaccccatcatctactgc
cgcagccccgacttcaggagcgccttccgcaagctgctctgctgcccacgccgtgctgac
cgccggctccacgccgtctcgcaggacctgcagcgctgcccctgtgccttcagccctcgg
gggggacccgcaggggacagcaaggcggctcccgggggccccggggaggatggcgaggct
cggggcggcggcagcaggacagaggagactcctcggccccaccggcagcgccccccgggc
gagtcccggctgcagggcgcgcagacctcgctgtgttcgcagctgcatgactttgctggc
ggagagacgcccgcgggtccgtccgaggccgggggtgcagaagcagcgccaggggtgacg
gtgctggcaggacccggagaggaggaggaggaggaggaggatctcccttgggaacgctgg
tggcttcgggacagcaccagctccttcgtgccgtggtacaagcttcgctccaaaccgggg
aagaaggaaaaggagagaggggagatcgaggtggatatccagttcatgaggagcaacatg
acagccagcatgtttgatctgtccatgaaggacaagccccgctctccctttggcaagctc
aaagacaagctcaagggcaagaggagcagcggcctctcggacacggcgtcagcgatcgtc
cccagcacctcccactcccctgctgacagcgaggatgaggcagtggagaaggagaagaag
aaatccaagttcaaagcgctgttctccaagcctggcctgcacaagacatccctgtcccag
tccatgtcagtgctgcccactcagcagcccctcacccagagggttcggctgcggcccagc
gacttccaggcacagtgggatgaggaggagtcccagacctctcctgcctcagaacgatcc
tttgaaagtgtgccagaacagaagccagctccttctcctctgtttaaatctcgtaagcca
gcctttttggacagtaggcagctaacccagggaaccactaaccacaccaaaaaggatggg
ctctctttgttcagtggccttaaatccaaaaacgatcccgtgtccaagtccagtctgtgc
atcaatggcagtcacgtttatatggaagagaccacgacgaaggacaagactccagcctcc
tccccctctcctcacaacctcaggaggaagcagctctttgcttcagaggagaacctgtcc
tccaggtccactaaaccacctgaggagatggggagagcctctcctgggcagccaatctct
gggtccacatccttggagaccttcaaatccatgactttgccatcatacaaactgctcagc
agtgaggagcacctggacaccagcgttccaccaagcgttgagcctgttagagagaccaaa
aaaccagaccagaaaaagtctgccttgctctccctggtcactgggaagaaggaaacagtg
aagcccagcgatgctgagattattcccgacaggaccctgcagagtgaggagaatacgatt
ccagaagagaagagtgaagaggaggccaaatgccctgaagccccagcagatctgggcaga
gggagcccctcaggagatgcccaccatgcagaggaggctgtcacaaccaagcagctgccc
agcccttgtgaggaggaacggaaacctgagaaagctgcagcagccaagaccaaagctgtg
aaacccagactgggcctgtctccagaggaggaacccaaagccacgcttcctactcttgca
cctgaccccctccctgctttcctctctgtgcaccgtatcagcagtgccaataatcctttt
atttctcaagtggggcagatggtccaagtgccagactctgaaaacatcactggttctcct
gcctctctcacttctcctgcttttgctgcagagctctggaatgacaagaaccctttcact
gctgagtgggacagggcatccagagccctggatcccaacagcatcgcccgtttcccttca
tcccatcatcctgcagcctctgttcccaaagtgcctcttcctgggcaggtctctgccagg
ggcaataatccttttgctgctgactgggggcagggtcctgagggttctgaggcttcctgg
ggtctctctggcccacacacaccttctgtcccctctgtctgtcctttcaatgacagcaat
ccctttgtgtccaagcgtggggcacaggcagtgccaggttcccaggctggttcttcccct
tcctgccttcctgctggggagaattgttcttctgcaggacaccctgctcgtggtgcttcg
gggggctctgcacatgtggctttaaccagtgatgtcacagctgagccagaccctctgggc
accttgtctgacccccctgggctggctgcagagccgcactgggattctgcccggcttcag
cctgagggttctttggaaagcagcaagccaggccatgggaaatctgtgtcctttgtcctt
ggggagtggcagggtgttccatcaggtgatgcaagtttgggtgggcaggaagggggagag
cagcccctggattccagtgggaggtcacagatgagttcaggggcagcaggagagcgagca
aggtttgggggtgacccatcgacagagctctctggggacagcacacatcccacctggagc
agtgatggaacagctgtggaggtcagtggtgggagcactgagccctgcacgaggggtgac
aaaggttttgtgtctctctccaagtgcagtgacagcctcgtgctggaggctgagcaggca
caatcccccaagggtgagctcagggaggagcaggagccctgtgctgggaagcagtgggca
gaacgtgtgcccatgttagagccccaggcacctccacctgctggaaatgatccagttcct
caagtccagcccacaccaagagcctgcactggggaaggggatgcagggagggctggcagg
gaggtccttgtgcccccaaagccagccccacgagtggctgtgctgctgaggaaaccgcca
gggactccccaggctgatgctcctgctccaggggatgctgcagaatccagcccagggctc
ccattccctgaggcctcagctgctcctgggtgcctccctcaagggggctccttggggact
gccacccctgcagtggcgcccagaggtaagagcaggcctgtagaaaaggagggtgctgct
ggtttgtctgtctgtctgacaaatgtcaggtctgccgttcctgttcctggggaccgtggc
tcggcgctgcccgtgatccccgagggaggctctgatgaggagctgctgggggactgccag
gacagctgtggggcctctgcaggtgacagaggtgttctagggaatggagagcagccccga
ggtttgacacctttgcatggaaagcagagagagctctctgatagctctgctgcagccccc
atgatcccggctgctccaggaggagaaccaggagccatgcctggtgcttgtgagccaggg
agtttgcctgtgctgcctgctgcagtgagggctcccagggtctgtgtccagggagctgac
tcaggcttaggtgtgacatctcattccagagtgtgtgagagtcatgctgagaaacaagag
ctggaaaggagtgcaggtgctgaggagtgtgcagagtgtgacttctctgagccttctgct
ttctcttcctccctgtcaagtccttgccagccccactcttcctctcattcccttctctct
gacaccccgagtcgtagagcagagtctccgaaaaagccaagagccgagggcttcgcagat
aaagcgggaaattcgggcaagaagaaacttctccaggcacgggtttcaccctctgaaacg
ttccccaaccacaccccatggtgtgaaaccgtgtctccccagcacagactccatcctgtg
aaaccaatgaatgccatggcaaacaaacctcagagcaagaacctgaatgtcatcagcacc
atgaatgaaaagctgctggaaatgagtgtgaagaaatatgatccctcagaccctgcctat
gcctatgctcagctgacacacgatgagctgatccagctggtgctgaaacagaaggatacc
attaccaggaaggacgtccaggtgcgggagctcgaggattacatcgacaacctgctggtc
agagtcatggaagaaaccccaaacatcctcagagtctccgtgtctggcaacaaaaaagct
gggaagatgtga
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integrated database retrieval system
