Geospiza fortis (medium ground-finch): 102032587
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Entry
102032587 CDS
T03755
Symbol
LDB3
Name
(RefSeq) LIM domain binding 3
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102032587 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102032587 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102032587 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
DUF6801
DUF3854
Motif
Other DBs
NCBI-GeneID:
102032587
NCBI-ProteinID:
XP_005417359
LinkDB
All DBs
Position
Un
AA seq
343 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKEPAWEINGNRTTF
SPLTNTATGPVGSVLATNGTFSGYLNQQEISLSNSSSYLNTTTVRSSMSSQSVTPDISPA
KSSLGSKASPAFAGGSSPAHQLSPARQYNNPIGLYSAETLREMAEMHKLSLNRRASEGGL
PRGALPIKDPHVDSASPVYQAVLKTQNKPEDDSEDWSRRSANLQSKSFRILAQMTGTEYM
QDPDEEALRRSRERFETERNSPRFAKLRNWHHGLSAQLLNVKS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagtgtgactctgaatggacctggaccctggggcttccgactgcaaggaggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaaccagggggaccttgtcgtggccattgatggagtcaacactgacagcatg
acccacctggaggcccagaacaaaatcaaatcagccagccacaacctgagcctcactctg
cagaaatctaaacgtccagtgccagtttcaaccacagctcccagaattgactctcccagg
gctgtaattcctcatcagaaggaacctgcttgggaaatcaatggcaacagaacaaccttc
agccctctaactaacacggcgactgggcctgtgggtagtgttttagcaaccaatggaacc
ttttcaggctacctcaaccagcaagagatcagcctttcaaatagctcttcctacctaaat
actaccacagttagatcttccatgtcctctcagtctgtgactcctgacatttcacctgcc
aagagctcgttaggttccaaagcaagccctgctttcgctggtggcagtagccctgctcac
cagctgagccctgcaaggcagtataacaaccccattggcctttactcggcagagaccctg
agggaaatggctgagatgcataaattgagtctcaaccgaagggcttcggaaggtggactt
cctagaggtgccctccctataaaggatcctcacgtagacagtgcctctccagtgtatcag
gctgtgcttaaaacccagaacaagcctgaggatgacagtgaggactggagccgtcgctct
gccaacctgcagtccaagtccttccgtatccttgcccagatgactggaaccgagtacatg
caagatccagacgaagaagccctgaggaggtcaagggagaggtttgaaacggaacgtaac
agcccacgctttgccaaattgcgcaactggcatcacggcctgtccgcgcagctccttaat
gttaaaagctaa
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