KEGG   Geospiza fortis (medium ground-finch): 102032684
Entry
102032684         CDS       T03755                                 
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102032684 (REXO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gfr03009]
    102032684 (REXO1)
Ribosome biogenesis [BR:gfr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    102032684 (REXO1)
SSDB
Motif
Pfam: EloA-BP1 RNase_T
Other DBs
NCBI-GeneID: 102032684
NCBI-ProteinID: XP_005427360
UniProt: A0A6I9HPC7
LinkDB
Position
Un
AA seq 1179 aa
MNKYLQCLASPGSSERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAV
KNEVEREQKKYEELLETTKEFGASEGSSLISNSPVSAAGPQNDSFASLEYNPGSYNFNNN
SDYNPTPLAAAGRSSKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPST
DLEYDPLSNYSARLLGKATTKGSKRDRASDYEDSYSPSRKKLCEDPDDDEVLARFSSSED
EAEVEYKTASGSSPSKAGSESESNESSSKEQSTKVEGSASQGSKEAAQHREDLPNSQKNL
AKNSSDKNSKAAKLCSGKNNKEIENKNKDSKDKTKKKKTDVSKAPGLSEAGKKEKNKNAD
KVLKKEEKLKTKNEEKNCKDKSVKVKTDGNLKKPEKQKSEKVDGCKKEKSKSSTSSSGKS
KSEGVTKGPEKVGSSKKDPQSKTADVKNGKESSGRKNKEKGTKSSLERKKEKVSCAGQGD
PKKGRKQQSLSHVDLFGDESGDEDDKGRPLSSSLLGVSSDLDGVDSGSASDSDRDRTKKA
KRSKLSKSSSSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPS
KEEANEEKTEDNLTTLFPGQKRRISHLVKQGNAETPSKPVVRPYRPPTAQEVCYQRIQLA
QQQAAQLVGAVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKAAVGGRSVTPSNDSE
ASTLPLKPCTLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYL
NLFIDECLKFCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPAST
NKTSNKKVVSHEAVLGGKLAAKTSFTLNHSGSLRAEDLTGAALYRRLKEYLMTEEQLKEN
GYPMPHPEKAGRAVLFTAEEKKVTDSSCRICCRCGTEYMVSASGSCIRREECVHHWGRLR
KQRVPGGWETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYA
LDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITL
RDVQAVLLNMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMA
DYLKRIIQDNVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgaacaaatacctgcagtgcttagcgagcccgggcagctcagagcgaggctatgatccc
tacaaccctgagctgcccaggccctcgctggaggtggaggatggctttctggctgacatt
acagatgtcacacctggaattctggagctggagctggtcaacaaggccattgaggcagtg
aagaacgaagtggagagggagcagaagaagtacgaggagctgctggaaaccacgaaggag
tttggtgcttcagagggctcctcactcatttcaaactcacctgtgtcagctgctgggcct
cagaatgattcctttgcatccttggagtacaatccagggagctataacttcaataataac
tcagattacaaccccactcctctggctgctgctggccgctccagtaaatacactttggat
tcctcccgctccaaagggagctcactggagtacgtccccaaggctgtggtgcagaataaa
aaatacagcagcactgtcactaacaacaaatatgtgattgatgactccaagccttccaca
gacttggaatatgaccccctttccaattactctgccaggctgttgggcaaagccacaacc
aaggggtccaaaagggacagggcctctgattatgaggactcctactctccatcaaggaag
aagctctgtgaagatcccgatgatgatgaggtgttggccaggttctcctcctctgaagat
gaggctgaggtggaatataaaacagcttctggtagttcaccctcaaaagctggttctgag
agtgagtcaaatgagtcctccagcaaagagcagagcacaaaagtggaaggctctgcttcc
caggggagcaaagaagcagcacagcacagggaggaccttccaaattcacagaaaaacctt
gccaagaactcatcagacaagaactcaaaggcagcgaagttgtgttctggtaagaacaac
aaggaaattgaaaataaaaacaaagactccaaagacaaaacaaaaaagaagaaaaccgat
gttagtaaagcaccaggcctcagtgaggctgggaagaaggagaaaaataaaaatgcagac
aaagtgctcaagaaagaagaaaaattaaaaaccaagaatgaagagaaaaactgcaaagac
aaaagcgtcaaagtgaaaacagatgggaacttgaagaaacctgaaaaacagaagtcagaa
aaagtagatgggtgtaagaaagaaaaatccaagtccagcaccagcagttcagggaaaagc
aagagcgagggtgtcaccaagggcccagagaaagtggggagcagcaagaaggatcctcag
agcaaaacagctgatgtgaaaaatggcaaggaaagctctggtcgtaaaaacaaggagaaa
gggaccaagagctccctggagagaaagaaggagaaggtcagctgtgcaggacaaggagac
cccaagaagggtcggaagcagcagagtttgagtcatgtggacctgtttggggatgagagt
ggagatgaggatgacaaaggccggcctttgtcctcctcattgcttggtgtgagctcagac
ttggatggggttgactctggctcagcctctgacagtgacagggacaggacaaagaaagca
aagcgctcaaagttgtccaagtcctcatcatcttcctctacatctgatgacattgattat
tccatccttgagaaagatgtggactttgagtcagatcccatggaggagtgtctcaggatc
tttaatgaatctaaagatgtgaaaacggaagacaagggaaggctcggcaaacagccatcc
aaagaggaagcaaatgaagaaaagacagaagataatttaactaccttgtttcctggccaa
aaaagaaggatctctcatcttgtcaaacaaggaaatgcagagaccccgagcaagccggtg
gtgcggccctaccgtccccccacggcccaggaggtgtgttaccagaggatccagctggct
cagcagcaggcagcacagctggttggggctgttcaaaagacctctctctgtttgccagga
gaaaagaggaggattgctcacgtgccaaatgcagccctcaccgcagcagccaagcaaagc
cttgggagcagtaaggcagctgttggtggcaggagtgtcacaccttccaatgactctgaa
gcctccacccttcctctgaaaccttgcaccttggctgggatggcttccaagaccaccagc
accatcgtgcccaaaagggtagcacatgttccctccttacagagcaccactttacagaga
cctgttattcccacagagtttggtgctaaagtcccaaccaacattcgtcagaggtatctc
aacctcttcattgatgagtgcctgaaattctgctcctcctcccaggaagccttcgacaag
gccctggcagaggagaaggtggcctacgagcgcagcacgagccgcaacatctacctgaac
gtggctgtgaacaccctgaagaagctccgcagcctcgtgcccaactccccagccagcacc
aacaagacaagtaacaagaaggtggtgtcccacgaggctgtgctgggagggaagcttgct
gccaagaccagcttcactctgaaccactcagggagcctgagagccgaggatctgacagga
gctgccctgtaccggcgcctcaaggagtacctgatgactgaggagcagctcaaggagaat
gggtacccaatgcctcaccctgagaaggctggacgggctgtgctcttcactgcagaggag
aagaaagtcactgactcctcgtgcaggatctgctgtcgctgtggcaccgagtacatggtg
tcagcctcggggagctgcatccgcagggaggagtgcgtccatcactgggggcggctgcgc
aagcagagagtgccaggtgggtgggaaactcactacagctgctgctccggagctgtgggg
tcaccaggctgccaggttgctaaacaacacgtgcacgatgggcgcaaggagagcctggat
ggttttgtgaagacttttgagaagctgcccacgactgatggctaccctgggatctatgcc
ttagactgtgaaatgtgctacaccaagcaaggactggagctgacaagagtaactgtgatc
aactcagagctgaaagtggtgtatgacacctttgtcaagccagactccaaggtggtggat
tacaacaccaggttctcaggtgtgacagaagaggacctggagaacacgagcatcaccctg
cgggatgtccaagccgtcctcctgaacatgttcagtgcagacaccattctcatagggcac
agcttggaaagcgacttatttgcactaaagctgatccatggcactgtggtggacacagca
atcgtgttcccccaccgcctggggctgccctacaagcgggcgctgcgcacgctgatggcc
gactacctcaaacgcatcatccaggacaatgtggaaggacacgactccagtgaggatgcc
agagcctgcatggagctgatggtgtggaagatcaaagaggatgcgaaggtgaagcgatga

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