Geospiza fortis (medium ground-finch): 102032684
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Entry
102032684 CDS
T03755
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102032684 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102032684 (REXO1)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-60S particles
RNases
102032684 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
102032684
NCBI-ProteinID:
XP_005427360
UniProt:
A0A6I9HPC7
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Position
Un
AA seq
1179 aa
AA seq
DB search
MNKYLQCLASPGSSERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAV
KNEVEREQKKYEELLETTKEFGASEGSSLISNSPVSAAGPQNDSFASLEYNPGSYNFNNN
SDYNPTPLAAAGRSSKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPST
DLEYDPLSNYSARLLGKATTKGSKRDRASDYEDSYSPSRKKLCEDPDDDEVLARFSSSED
EAEVEYKTASGSSPSKAGSESESNESSSKEQSTKVEGSASQGSKEAAQHREDLPNSQKNL
AKNSSDKNSKAAKLCSGKNNKEIENKNKDSKDKTKKKKTDVSKAPGLSEAGKKEKNKNAD
KVLKKEEKLKTKNEEKNCKDKSVKVKTDGNLKKPEKQKSEKVDGCKKEKSKSSTSSSGKS
KSEGVTKGPEKVGSSKKDPQSKTADVKNGKESSGRKNKEKGTKSSLERKKEKVSCAGQGD
PKKGRKQQSLSHVDLFGDESGDEDDKGRPLSSSLLGVSSDLDGVDSGSASDSDRDRTKKA
KRSKLSKSSSSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPS
KEEANEEKTEDNLTTLFPGQKRRISHLVKQGNAETPSKPVVRPYRPPTAQEVCYQRIQLA
QQQAAQLVGAVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKAAVGGRSVTPSNDSE
ASTLPLKPCTLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYL
NLFIDECLKFCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPAST
NKTSNKKVVSHEAVLGGKLAAKTSFTLNHSGSLRAEDLTGAALYRRLKEYLMTEEQLKEN
GYPMPHPEKAGRAVLFTAEEKKVTDSSCRICCRCGTEYMVSASGSCIRREECVHHWGRLR
KQRVPGGWETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYA
LDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITL
RDVQAVLLNMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMA
DYLKRIIQDNVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatacctgcagtgcttagcgagcccgggcagctcagagcgaggctatgatccc
tacaaccctgagctgcccaggccctcgctggaggtggaggatggctttctggctgacatt
acagatgtcacacctggaattctggagctggagctggtcaacaaggccattgaggcagtg
aagaacgaagtggagagggagcagaagaagtacgaggagctgctggaaaccacgaaggag
tttggtgcttcagagggctcctcactcatttcaaactcacctgtgtcagctgctgggcct
cagaatgattcctttgcatccttggagtacaatccagggagctataacttcaataataac
tcagattacaaccccactcctctggctgctgctggccgctccagtaaatacactttggat
tcctcccgctccaaagggagctcactggagtacgtccccaaggctgtggtgcagaataaa
aaatacagcagcactgtcactaacaacaaatatgtgattgatgactccaagccttccaca
gacttggaatatgaccccctttccaattactctgccaggctgttgggcaaagccacaacc
aaggggtccaaaagggacagggcctctgattatgaggactcctactctccatcaaggaag
aagctctgtgaagatcccgatgatgatgaggtgttggccaggttctcctcctctgaagat
gaggctgaggtggaatataaaacagcttctggtagttcaccctcaaaagctggttctgag
agtgagtcaaatgagtcctccagcaaagagcagagcacaaaagtggaaggctctgcttcc
caggggagcaaagaagcagcacagcacagggaggaccttccaaattcacagaaaaacctt
gccaagaactcatcagacaagaactcaaaggcagcgaagttgtgttctggtaagaacaac
aaggaaattgaaaataaaaacaaagactccaaagacaaaacaaaaaagaagaaaaccgat
gttagtaaagcaccaggcctcagtgaggctgggaagaaggagaaaaataaaaatgcagac
aaagtgctcaagaaagaagaaaaattaaaaaccaagaatgaagagaaaaactgcaaagac
aaaagcgtcaaagtgaaaacagatgggaacttgaagaaacctgaaaaacagaagtcagaa
aaagtagatgggtgtaagaaagaaaaatccaagtccagcaccagcagttcagggaaaagc
aagagcgagggtgtcaccaagggcccagagaaagtggggagcagcaagaaggatcctcag
agcaaaacagctgatgtgaaaaatggcaaggaaagctctggtcgtaaaaacaaggagaaa
gggaccaagagctccctggagagaaagaaggagaaggtcagctgtgcaggacaaggagac
cccaagaagggtcggaagcagcagagtttgagtcatgtggacctgtttggggatgagagt
ggagatgaggatgacaaaggccggcctttgtcctcctcattgcttggtgtgagctcagac
ttggatggggttgactctggctcagcctctgacagtgacagggacaggacaaagaaagca
aagcgctcaaagttgtccaagtcctcatcatcttcctctacatctgatgacattgattat
tccatccttgagaaagatgtggactttgagtcagatcccatggaggagtgtctcaggatc
tttaatgaatctaaagatgtgaaaacggaagacaagggaaggctcggcaaacagccatcc
aaagaggaagcaaatgaagaaaagacagaagataatttaactaccttgtttcctggccaa
aaaagaaggatctctcatcttgtcaaacaaggaaatgcagagaccccgagcaagccggtg
gtgcggccctaccgtccccccacggcccaggaggtgtgttaccagaggatccagctggct
cagcagcaggcagcacagctggttggggctgttcaaaagacctctctctgtttgccagga
gaaaagaggaggattgctcacgtgccaaatgcagccctcaccgcagcagccaagcaaagc
cttgggagcagtaaggcagctgttggtggcaggagtgtcacaccttccaatgactctgaa
gcctccacccttcctctgaaaccttgcaccttggctgggatggcttccaagaccaccagc
accatcgtgcccaaaagggtagcacatgttccctccttacagagcaccactttacagaga
cctgttattcccacagagtttggtgctaaagtcccaaccaacattcgtcagaggtatctc
aacctcttcattgatgagtgcctgaaattctgctcctcctcccaggaagccttcgacaag
gccctggcagaggagaaggtggcctacgagcgcagcacgagccgcaacatctacctgaac
gtggctgtgaacaccctgaagaagctccgcagcctcgtgcccaactccccagccagcacc
aacaagacaagtaacaagaaggtggtgtcccacgaggctgtgctgggagggaagcttgct
gccaagaccagcttcactctgaaccactcagggagcctgagagccgaggatctgacagga
gctgccctgtaccggcgcctcaaggagtacctgatgactgaggagcagctcaaggagaat
gggtacccaatgcctcaccctgagaaggctggacgggctgtgctcttcactgcagaggag
aagaaagtcactgactcctcgtgcaggatctgctgtcgctgtggcaccgagtacatggtg
tcagcctcggggagctgcatccgcagggaggagtgcgtccatcactgggggcggctgcgc
aagcagagagtgccaggtgggtgggaaactcactacagctgctgctccggagctgtgggg
tcaccaggctgccaggttgctaaacaacacgtgcacgatgggcgcaaggagagcctggat
ggttttgtgaagacttttgagaagctgcccacgactgatggctaccctgggatctatgcc
ttagactgtgaaatgtgctacaccaagcaaggactggagctgacaagagtaactgtgatc
aactcagagctgaaagtggtgtatgacacctttgtcaagccagactccaaggtggtggat
tacaacaccaggttctcaggtgtgacagaagaggacctggagaacacgagcatcaccctg
cgggatgtccaagccgtcctcctgaacatgttcagtgcagacaccattctcatagggcac
agcttggaaagcgacttatttgcactaaagctgatccatggcactgtggtggacacagca
atcgtgttcccccaccgcctggggctgccctacaagcgggcgctgcgcacgctgatggcc
gactacctcaaacgcatcatccaggacaatgtggaaggacacgactccagtgaggatgcc
agagcctgcatggagctgatggtgtggaagatcaaagaggatgcgaaggtgaagcgatga
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