Geospiza fortis (medium ground-finch): 102032750
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Entry
102032750 CDS
T03755
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04137
Mitophagy - animal
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102032750
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102032750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102032750
03009 Ribosome biogenesis [BR:
gfr03009
]
102032750
04131 Membrane trafficking [BR:
gfr04131
]
102032750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102032750
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102032750
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102032750
Membrane trafficking [BR:
gfr04131
]
SNARE
SNARE associated proteins
Others
102032750
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102032750
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102032750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
102032750
NCBI-ProteinID:
XP_014166883
UniProt:
A0A6I9ZE73
LinkDB
All DBs
Position
Un
AA seq
761 aa
AA seq
DB search
MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC
PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG
HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR
ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA
RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI
PLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES
EIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS
RGFGSFRFPSGNQGSTGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactgcagctgtttagaggagacactgtcctgctaaaaggaaagaagaggaga
gaagcagtctgcattgttctgtcagatgatacctgctcagatgagaagattcgcatgaat
agggttgttcgaaacaacctgagagtgcgcctgggtgacgtcatcagcatccagccttgc
ccagatgtgaaatatggcaaacgtatccatgtgttaccaattgatgacacagtagaaggg
atcacagggaatctgtttgaggtctatctcaagccatatttcctggaagcttacagaccc
atcaggaaaggtgacatcttcttggtgcgtggagggatgcgtgcagtggagttcaaagtg
gtggagacagatccaagcccatactgcatagtggctccggacacagtgatccattgtgag
ggagaacccatcaaaagagaggatgaagaggagtcgctgaatgaagtgggctatgatgac
attggtggctgccggaagcagctggctcaaatcaaagaaatggtggaacttcccctccga
caccctgctctcttcaaggccataggggtgaagcctccacgtgggatcctgctgtatggt
cctcctggcactggtaaaacactgattgcccgagcggtggccaatgaaacaggggctttc
ttcttcctgatcaatggtcctgagatcatgagcaagctggctggtgagtctgagagcaac
ctgaggaaagcctttgaagaagcagagaagaatgctcctgccatcatcttcattgatgaa
ctggatgccattgctcctaaaagagagaagacacatggagaggtggaacgtcgcatcgtg
tctcagctgctgactcttatggatggactgaaacagagagcacatgtgatcgtgatggca
gccaccaacagacctaatagcattgacccagcactcaggcgatttggtcgttttgacaga
gaggtagatattggtatccctgatgccactgggcgcctggagatcctgcagatccacaca
aaaaatatgaaactggctgatgatgtggatctggaacaggtggcaaacgagacccatggc
catgttggtgctgacttggctgctctttgctcagaagctgctcttcaggcaatcagaaag
aagatggatctcatagacctagaagatgaaaccattgatgctgaagtgatgaactcactg
gctgtgaccatggatgacttcaggtgggctctgagccagagcaacccttctgctcttagg
gagacagtggtggaggtgccacaagttacctgggaagatattggtggtttagaagatgta
aagagagaactccaggaacttgtacagtatcctgtggaacacccagacaaattcctcaaa
tttggcatgaccccatcaaaaggggttctgttctatgggccacctggttgtggtaagaca
ctcctggccaaagccattgctaatgaatgccaggcaaacttcatttccatcaaggggccg
gaattgctcaccatgtggtttggtgagtctgaagccaacgtgcgtgagatctttgacaaa
gctcgccaagcagccccatgtgtgctcttctttgatgagctggactccatcgccaaggcc
cgaggtgggaatatcggtgatggcggtggtgctgcagatcgtgtcatcaaccagattctg
accgagatggatggcatgtccaccaagaaaaacgtcttcatcattggtgccaccaacagg
ccagacatcattgacccagccatcctgcgccccggccgcctggatcagctcatctacatc
cccctgcctgatgagaagtcccgggttgcaattcttaaggccaatctgaggaaatcacca
gttgccaaggacgttgacctggatttcctagctaagatgaccaatggcttttcgggggct
gacctgacagaaatttgccagcgtgcctgcaaactggccatccgcgaatccatcgagagt
gagatcaggcgagagcgtgagaggcagaccaacccttctgccatggaggtggaggaggat
gacccggtccctgagatacgcagggatcactttgaggaggccatgcgctttgctcgccgc
tctgtcagtgacaatgacatcaggaaatatgagatgtttgcacagaccctacagcagagc
cgtggctttggcagcttcaggttcccatcaggcaaccagggcagtaccggtccgagccaa
ggtacaggaggtggcagcgggggcaacgtgtacagcgaagacaatgacgacgatctctat
ggttaa
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integrated database retrieval system
