Geospiza fortis (medium ground-finch): 102032792
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Entry
102032792 CDS
T03755
Symbol
TUB
Name
(RefSeq) tubby bipartite transcription factor
KO
K19600
tubby and related proteins
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102032792 (TUB)
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102032792 (TUB)
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102032792 (TUB)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Other domain-containing proteins
Tubby family proteins
102032792 (TUB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tub
Tub_N
DUF3527
Motif
Other DBs
NCBI-GeneID:
102032792
NCBI-ProteinID:
XP_005426364
LinkDB
All DBs
Position
Un
AA seq
433 aa
AA seq
DB search
MVQSNVDSRARTRRTKHSEEQAPLVESYLNSNSSTIYHGIDGPAAFQDDVQKIGSQVQIL
TVGQSSHDEDDGDKVATGQQQQSKQDLRTAMQKKDPHANTSWSSSTSQSSLVALDHVPGI
SSSMNFDEEEDEEDEDSSSSSQLNSNTRPGSATSKKSNKEAASAPSPSTNEPLIDVDDLE
EFAVRPAPQGVTVKCRITRDKKGMDRGMYPTYYLHLEREHGKKVFLLAGRKRKKSKTSNY
LISIDPTDLSRGGESFIGKLRSNLMGTKFTVYDNGVNPMKTTSSLEASTLRQELAAICYE
TNVLGFKGPRKMSVIIPGMNMDHERVSIRPRNEHETLLARWQNKNTESVIELHNKTPVWN
DDTQSYVLNFHGRVTQASVKNFQIIHDNDPDYIVMQFGRVAEDVFTMDYNYPMCALQAFS
IALSSFDSKLACE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggttcagtccaacgtggacagccgggcaaggacgcgcaggacgaaacattcggaggag
caggccccgctggttgagtcctatctcaacagcaacagcagcaccatatatcatgggatt
gatggcccagctgcttttcaagatgatgttcagaagataggaagtcaagtgcagattctc
actgttggacagtctagccatgatgaagatgatggtgacaaagtggctactggccaacaa
cagcaaagcaagcaagatcttagaacagcaatgcagaagaaagatccccatgcaaataca
tcctggtcctcttccacctcccaatccagtcttgtcgccctggatcatgttcctggcatt
tcaagtagcatgaattttgatgaggaagaagatgaggaggatgaagacagctccagttct
tcacagttaaacagtaacacccggcctggttctgccacgagcaagaaatccaataaggaa
gcggcctcagctcccagtccttccacaaatgagcctctcatagatgtggatgacctggag
gagtttgctgtcagacctgccccacagggggtcactgtcaagtgcaggatcacaagagac
aagaagggaatggaccgagggatgtaccctacttattacctccacttggaaagggagcat
ggtaaaaaggtgtttctgttggctggaaggaaacgaaagaagagtaaaacctctaattac
ctcatctctatagacccaactgacctgtctcggggtggagagagttttattggaaaactg
agatcaaatcttatgggaactaagtttacagtttatgacaatggagtaaatccaatgaaa
acaacatccagcctggaggcgagcaccctgcgtcaggagctagctgctatttgttatgaa
acaaatgtcctggggtttaaaggacctcgtaaaatgagcgtgatcataccaggaatgaat
atggatcatgaaagagtttccatcagaccacgaaatgaacatgagacgcttcttgcaagg
tggcagaacaaaaacacagagagtgtcattgagctgcacaacaaaaccccagtctggaat
gatgacacccagtcctacgttctgaatttccacggtcgagtcacgcaggcctcggtgaag
aacttccaaattatccatgataatgatcctgactacatcgtgatgcagtttggccgcgtg
gctgaggacgtgttcaccatggactacaactacccaatgtgtgcactacaagccttttcc
attgccctttccagttttgacagcaagctggcttgtgagtaa
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