Geospiza fortis (medium ground-finch): 102032827
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Entry
102032827 CDS
T03755
Symbol
LRRC15
Name
(RefSeq) leucine rich repeat containing 15
KO
K06260
platelet glycoprotein V
K28877
leucine-rich repeat-containing protein 15
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102032827 (LRRC15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102032827 (LRRC15)
04090 CD molecules [BR:
gfr04090
]
102032827 (LRRC15)
Transporters [BR:
gfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
102032827 (LRRC15)
CD molecules [BR:
gfr04090
]
Proteins
102032827 (LRRC15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LRRCT
Syndecan
Motif
Other DBs
NCBI-GeneID:
102032827
NCBI-ProteinID:
XP_014167732
LinkDB
All DBs
Position
Un
AA seq
1118 aa
AA seq
DB search
MEQGGWQRWLLLLGGIQLASSQCPEQCQCVRSAQVECFGADISTVPSPIPANAMTLQIIN
TRIAELGDAAFGNASLLIGLRMEKNLLSRISPGAFQNLPDLRYLSLASNKLQELPVQVFE
PLDKLESLLLSSNQILQVEPSHFAHLSNLKELQLHGNNLKELQEGVFDQLTSLTKLNLAR
NNIDRLPPRAFERLARLQVLRLYENRLRHIPVGTFDGLPELQELGLHQNHLETLSPELFV
HNTNLQKLYLSNNFLTTLPSGVFLPLHALAKITLHVNRLRDISPSAFGPMPNLQELWLYE
NELSTLPTAVFSNLTQLQLLVLSKNRLRSVPPGAFQGLGELLELSLHSNALRRLDVQALE
GMPKLQNISLHHNQLQALPRGLFRATPGLRHLQLHFNALEYLPAGIFSPLTALREVRLHN
NSWRCDKGILPLQGWLQENPHKVGEIPPLCAQPPALQGIPITGLPQDQFIDPQPPTAAPH
ASTLLPADTSEAASDDASAAGDASMEPPTGLPASPPEDEEEKKEEEERGQWGLTRLQSGV
VVAVIVLVSVALLAALVALVVYGCRKKSHVVLMRMKCRLLIYVLLGLGSLLVGALSPSCP
PACQCWDTSKVFCSNERIREIPEGLPGSATHLFFVETALSSIHSGHLGSSTTLTKLVFIN
NNIQELQAGAFQGLPSLTELEVSGNPLPAVSPGMLAGLTSLSKLSLSANAIRTLQPGLFT
ASCRLQDLSLSGNRIEALPPGIFRPLRRLQALDLSQNSLPELPDGLLTPLVALRVLKLSD
NLLARVPPGAFRALGQLTELHLDGNRLEELPSGIFSRLGALRRLQLQHNALGSLAPDIFT
GLLNLTVLSLEGNNLATMPAILFTGTPGLLHLSLARNQLETLPQELFANLSVLETLELSH
NAIDHLPTGAFQGLEGLTELQLSHNNLSRLPAGLLAGLPLLTALVLDHNCLARLPAGLFD
ANDELVRVGLAGNPWVCDCHLSYLLHWLQSFAEPLIHGQAFCASPAALQGRSLLEVSRGQ
LQCPGAHGGVPPEEGWDTDAPGQCTYSDPEGTVSVACNATSCQELNLRLPPPGPEQGLGP
AYRRAWLLRSRCGTLQVSVLVTAQRGNEVTPPGPPAVP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggaggctggcagcgctggctgctgctgctggggggcatccagctggccagc
agccagtgcccagagcagtgccagtgtgtccgcagtgcccaggtagagtgctttggtgct
gacatcagcacggtgcccagccccatccctgccaacgccatgaccctgcagatcatcaac
acgcgcatcgccgagctgggcgacgccgccttcggcaacgcctccctgctcatcgggctg
cgcatggagaagaacctcctgtctcgcatcagccccggggccttccagaacctgcccgac
ctgcgctacctcagcctggccagcaacaagctgcaggagctccctgtgcaggtctttgag
cctctggataagctggagtctctgctcctctccagcaaccagatcctccaggttgagcct
tcccacttcgcccatctgagcaacctcaaggagctgcagctgcacgggaacaacctgaag
gagctgcaggagggggtgtttgaccagctgaccagcctcaccaagctcaacctggccagg
aacaacatcgaccgcctgccgccccgggcctttgagcggctggcgcggctgcaggtgctg
cggctctatgagaaccggctccggcacatcccggtgggcaccttcgatgggctgccggag
ctgcaggagctggggctgcaccagaaccatctggagacgctgtccccggagctctttgtg
cacaataccaacctgcagaagctctacctgtccaacaacttcctcaccactctgccaagt
ggtgtcttcttgcccctgcacgctctcgccaagatcactctgcacgtcaaccgcctgcgg
gacatctcccccagtgcctttgggcccatgcccaacctgcaggagctctggctttatgag
aatgagctttccaccctccccactgccgtcttcagcaacctgacccagctgcagctcctg
gttctcagcaagaaccggctgcggtcggtgccaccgggggctttccagggcttgggggag
ctgctggagctatcgctgcactccaatgccctgcgccgcctggatgtccaggcactggag
gggatgcccaagctgcagaacatctctctgcaccacaaccagctgcaggcactgccacgg
ggcctcttcagggccactcctgggctgcggcacctgcagctgcacttcaatgccctggag
tacctccctgccggcatcttctccccgctgactgccctgcgagaggtgaggctgcacaac
aactcctggcgctgtgacaagggcatcctgcccctgcagggctggctgcaggagaaccct
cacaaggtgggtgagatacccccgctgtgtgcccagcctcccgccctgcagggcatcccc
atcaccgggctgcctcaggaccagttcatcgacccccagccccccactgctgctcctcat
gccagcaccctgctccctgctgacacctctgaggcagcatcagatgatgcctcagcagca
ggagatgcctcgatggagccccccacggggctgccagcctccccaccggaggatgaggag
gagaagaaggaggaggaagagagagggcagtgggggctgacacgcctgcagagtggggtg
gtggtggcagtcatcgtgctggtgagtgtggccctgctggctgctctggtggcactggtg
gtctatggctgtaggaagaagagccacgttgtgctcatgaggatgaagtgcaggctgctg
atctacgtgctgctggggctggggtccctgctggtgggggcactgtccccatcctgcccc
cccgcctgccagtgctgggacacctccaaagtcttctgctcaaacgaaaggatacgggag
atcccggagggcctgccgggaagtgccacccacctcttcttcgtggagacagccctgagc
agcatccacagcgggcacttgggctccagcaccacgctcactaagctggtcttcatcaat
aacaacatccaggagctgcaggctggtgcctttcaggggctgcccagcctcactgaactg
gaggtgtcaggcaaccccttgccagctgtcagccctgggatgctggcagggctgaccagc
ctcagcaagctctccctcagtgccaatgccatccgcaccctgcagccagggctcttcact
gcctcttgccgcctgcaggacctgagcttgtcagggaacaggatcgaggcactgccccct
ggcatcttccgcccactccggcggctccaggccctggacctgtcacagaattctctgccc
gagctgccggatgggctgctgaccccacttgtcgcccttcgtgtcctcaagctcagtgac
aacctgctggcacgggtgcctcctggtgctttcagggcacttggccagctgaccgagctc
cacctggatggcaaccggctggaggagctgccctcgggcatcttctccaggctgggagca
ctgcggcggctgcagctgcagcacaatgccctgggcagcctggcacctgacatcttcacg
ggtctcctcaacctcactgtcctcagcctggagggaaacaacctggccaccatgcctgcc
atcctgttcactggcacccctggcctcctccacctctcgttggctcgcaaccagctggag
acactgccccaggagctctttgctaacctgtcagtgctggaaaccctggagctctcacac
aatgccatagatcacctgcccaccggggctttccagggtctggaagggctgacagagctc
cagctgagccacaacaacctctccaggctgccggcggggctgctggccgggctgcccctc
ctcaccgccctggtgctggaccacaactgcctggcccgcctgcccgccgggctcttcgat
gccaatgatgagctggtgcgtgtggggctggctggcaacccctgggtctgtgactgccac
ctctcctacctcctgcactggctccagagctttgctgagcccctcatccacggccaagcc
ttctgtgccagcccagctgctctccagggccggtccctgctggaggtctcccgcgggcag
ctgcagtgcccgggagcacacggtggtgtccccccggaggagggctgggacacagatgct
ccggggcagtgcacctacagcgaccccgagggcacggtgagcgtggcctgcaatgccaca
tcgtgccaggagctgaacctgcgcctccctcctcccgggccggagcagggcctggggccg
gcctaccggcgggcctggctgctgcgctcccgctgcggcacgctgcaggtcagcgtcctt
gtcacagcacagagagggaacgaggtcacaccaccaggtccccccgccgtgccctaa
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