Geospiza fortis (medium ground-finch): 102032842
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Entry
102032842 CDS
T03755
Symbol
NUP85
Name
(RefSeq) nucleoporin 85
KO
K14304
nuclear pore complex protein Nup85
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102032842 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102032842 (NUP85)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102032842 (NUP85)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102032842 (NUP85)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102032842 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
102032842
NCBI-ProteinID:
XP_005424682
UniProt:
A0A6I9HN37
LinkDB
All DBs
Position
Un
AA seq
631 aa
AA seq
DB search
GVAAARALLPGRCCPALTGSVAGTGDGAPSSSCVFVVRRDQDIYIHTLRKLFNESHGIFM
GLQRSEEELAGKSRKAQLVQVSKNYRSVIRACMEDMHQAAVSTRDPALQGQYSTQVSILS
AMELIWNLCEILFVEAATAGPLLLRLLDWVRLHVCDVDSMVREVLSSESPSKHKLFWNVV
DVFVLQGRMDEARHLLSKEASANPASMNMYKILDDLMKKMPVPSLGNTQTLTELELKWQH
WHEECQRYLQDGTFASNPHMESICKMLLGDEDAILEKKELMTTWYHFLVTRLLYSHPTVK
PMELRFYAQSSMDLFLGGESSPEPLDMILMAAFEFEMHQVIKECSIVLSNWWFVAHLTDL
LDHCKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLGVDYFDHCPEFGRVYLELHIE
RIPLSTEQKALKVLRICEQRQMHEQVRSICKIMAMKALRNNRLGSALSWSIRAKDAAFAT
LISDRFLKDYCEKGCFSDLDLIDNLGPSMLLSDRLTFLGKYREFHRLYGEKRFAEAARLL
LTLMTAHIAPCSFWMTLLTDALPLLEQKEVIFSAEQTYELMRCLEDLTAGNPDKQKFQDD
DVETTKVEMLRLALARNLARVIVKEGTVEGS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
ggggtcgctgctgcccgggcgctgctgcccgggcgctgctgcccggcgctgacgggctct
gttgcagggaccggggatggagcaccgagctcctcctgcgtcttcgtggtccgcagggac
caggacatttacatccacaccctgcggaaactcttcaacgagtcgcacgggattttcatg
ggactgcagcggagcgaggaggagctggcggggaagtcgcggaaggcgcaattggttcaa
gtgagtaaaaactaccggtcagtgataagagcctgcatggaggacatgcaccaggcagct
gtttcgacccgggaccctgccttgcaaggccagtacagcactcaggtttccattctctct
gcaatggagctgatctggaacctgtgtgagattctgtttgtggaagcagctacagctggg
cccctcctgctgcgcctcctggactgggtgcggctccacgtgtgtgacgtggacagcatg
gtccgggaagttctgagcagtgagagtccatccaaacacaagctcttctggaacgtggtg
gatgtctttgtgctccaaggccggatggatgaagcacggcacctgctctccaaggaagcc
agtgccaatcccgcatccatgaacatgtacaaaatcttagatgacttgatgaagaagatg
cctgtgcccagtctcggcaacacccagactctgacagagctggagctgaagtggcagcac
tggcacgaggaatgtcagcggtatctacaggatgggacttttgcttccaatcctcacatg
gagtccatctgcaagatgctgctgggagatgaggatgccattttggagaagaaggagctc
atgaccacctggtatcacttcctcgtcacccggctcctgtattcccacccgacggtgaag
ccgatggagctgcgtttctatgcacagtctagtatggacctgttcctgggtggagagagc
agccctgagcctctggacatgattttaatggcagcctttgaatttgagatgcatcaagtg
atcaaggaatgcagcattgtcctgagcaactggtggtttgtggctcatctgactgacctg
ttggatcactgcaaactcctgcagtctcacaatctctattttggttcaaatatgcgtgaa
ttcctcctgctggagtatgcctcaggactcttctcccatcacagcctgtggcagctgggg
gtggattacttcgaccactgcccggagttcggccgggtgtacctggagctgcacatcgag
cgcatcccgctcagcacggagcagaaggccctcaaggtgctgaggatctgtgagcagagg
cagatgcatgaacaagtgcgcagcatctgtaagatcatggccatgaaggctctgcggaac
aaccgcctgggctcggccctgtcctggagcatccgggccaaggacgcagcgtttgccacc
ctcatctcggaccgattccttaaggactactgtgaaaaggggtgtttctctgacctggac
ctcattgacaatctgggcccatccatgctgctcagtgaccgcctcacattccttggcaag
taccgggagttccaccggctctacggcgagaagcggttcgcggaggcggcgcggctgctg
ctgacgctgatgacggctcacatcgccccctgctccttctggatgacgctgctcacggac
gcgctcccgctgctggagcagaaggaggtcatattttcagcagagcagacttacgagttg
atgcgatgcctggaagacctgacagcagggaatccagacaagcagaaattccaggatgat
gatgttgagacaaccaaagtggaaatgctgagactcgcccttgcacggaacctcgcacga
gtcatcgtcaaagaaggcaccgtggaaggatcttga
DBGET
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