Geospiza fortis (medium ground-finch): 102033028
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Entry
102033028 CDS
T03755
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gfr01009
]
102033028
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102033028
Protein phosphatases and associated proteins [BR:
gfr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102033028
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102033028
mRNA cycle factors
Stress granule specific factors
102033028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
102033028
NCBI-ProteinID:
XP_005430844
UniProt:
A0A6I9HTQ7
LinkDB
All DBs
Position
Un
AA seq
591 aa
AA seq
DB search
MAQVKMQTTANLSGPTMAPVVLPLPVTATNTSSMNGSISESAASCSSPTASLVDPVSLIN
SPAPLQDNMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKMFTVQLTLGEQTWE
AEGSSIKKAQHAAASKALNETTLPKPTPRPPKNNVNNNPGSITPTVELNGLAMKRGEPAI
YRPLDPKPIPNYRANYNFRGMYNQRYHCPVPKIFYVQLTVGNSEFFGEGKTRQAARHNAA
MKALQALQNEPIPEKLPQNGEPGKESEEDKDANKSEISVVFEIALKRNIPVTFEVIKESG
PPHMKSFVTRVTVGEFTAEGEGNSKKLSKKRAAMAVLQELKKLPPLPVIEKPKLYFKKRP
KTILKTGPEYGQGMNPISRLAQIQQAKKEKEPEYVLLSERGMPRRREFVMQVKVGNDITT
GTGPNKKIAKRNAAEAMLLQLGYKASTPLQDQTEKLGENKSWNGQNVGFPEPTSNTPKGI
LHLSPDVYQEMEASRNKSAPGTTVSYMPSKEMSQTSSSFFSISPTTNSTATIARELLMNG
TSPTAEAIGLKGISPASPCSTVQPSKQLEYLARIQGFQVWEGENEALQPES
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttaaaatgcagactacagcaaacctgtctggacccaccatggcccctgtg
gtgctacccctgccagttacagctacaaatacatcctcaatgaatggatccatttcagaa
tcggctgccagctgtagcagtcctactgccagccttgtggatcccgtgtctttgatcaac
tcaccagctcctctccaagataacatggcaaaccccaaagagaaaactccaatgtgtctg
gtaaatgagttagcccgtttcaatagaattcaaccccagtataagcttctgaatgaaaga
gggcctgctcatgccaagatgttcacagtgcagctgactcttggagaacagacctgggaa
gctgaaggaagcagtattaaaaaggcccaacatgctgctgctagcaaagcattgaatgaa
accacccttcccaagccaacgcctagaccacccaaaaacaatgtaaataataatccaggc
agtataacaccaactgtggaactgaatggtctggcaatgaaaaggggagaacctgccatc
tacaggccgttagatccaaagccaatcccaaattacagagcaaattataatttccggggc
atgtacaatcagaggtatcactgcccagtgcctaaaattttctatgtccagttaactgtt
ggcaacagtgagttttttggtgaaggaaagactcgtcaagctgctagacataatgctgca
atgaaggcccttcaagctcttcagaatgagcctattccagaaaaattacctcagaatgga
gaaccaggaaaagaatcagaagaagataaagatgcgaacaaatctgaaatcagcgtagtg
tttgaaattgctttgaagcgcaatatacctgtcacttttgaggtgattaaagaaagtgga
cctcctcacatgaagagctttgttacacgagttacagtaggagaattcactgcagaagga
gaagggaacagtaagaaactctcaaagaaacgtgctgcaatggctgtactacaagaactt
aagaaacttcctcctcttcctgtgattgaaaagccaaaactttactttaaaaagcgtcca
aaaacaatattgaagactggaccagaatatggtcaaggaatgaatcccatcagtcgtttg
gctcagatccaacaggccaaaaaggagaaggagccagagtatgttcttctttcagagaga
ggaatgcctcgccgtcgggaatttgttatgcaggtaaaagtaggcaatgacattactact
ggaacaggcccaaacaagaaaatagctaaaagaaatgcagcggaagcaatgttgttacag
ctgggatacaaagcctctactcctcttcaagatcagacagaaaagcttggagaaaacaaa
agttggaatggccaaaatgttgggtttcctgagccaacaagtaatacaccaaagggaatt
ctccatctctctcctgacgtatatcaagagatggaagcaagccgcaacaaatcagcccct
ggtaccactgtaagctatatgccatccaaagaaatgagccagacttctagctctttcttc
agcatatctcctaccacaaatagcacggccaccattgccagggaacttctcatgaatgga
acgtccccaactgccgaagccataggtctaaaaggaatatctcctgcttccccctgttct
acagtgcagccttcaaaacagctggaatatttggcaaggattcaaggctttcaggtatgg
gagggggaaaatgaagctcttcagccagaatcatag
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