Geospiza fortis (medium ground-finch): 102033045
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Entry
102033045 CDS
T03755
Symbol
CDKAL1
Name
(RefSeq) CDK5 regulatory subunit associated protein 1 like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfr03016
]
102033045 (CDKAL1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102033045 (CDKAL1)
Transfer RNA biogenesis [BR:
gfr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102033045 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
102033045
NCBI-ProteinID:
XP_005421024
UniProt:
A0A6I9HH57
LinkDB
All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAENLKPHDRQFVRRNVFPKVRKRNSQKNAQTDDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSDEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRRSAQNGTKWKAQPNAEIPVKTRL
SSWMALQLPWQQEGGGLKILSVSLALLAVLLMLYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgaatcagtgcttgaggatattgaagacatcgtgtcagcagagaat
ttgaagccacacgatcggcagtttgtgagaaggaatgtttttcccaaagtgcgaaaacgc
aactcccagaagaacgctcagacagatgatgagcccccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacgtggggatgttctcacaataactcagatggtgaatac
atggctggacagctggctgcatatggatacaaaattacagataactctgatgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgtgtaccacaagct
caacctcgccaggagtacctgaaaggcttaagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaataatttctatcaacacagggtgtctcaatgcatgtacctactgtaaa
acgaagcatgccagaggagatctagcaagttatcctattgaagaactggtggacagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatccaagagtgtatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggatatgaagagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggatttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
ctgtataggtttccaagcttgtttattaatcaattctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacgaaggatctgtcccag
ctgtttcattcatacaacccatatgaccataaggttggtgagaggcagagagttctagta
acagaagaatcctttgactccaattactatgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaagggacagccagtatcagatgccagagttcatactgcatccatc
agcagaccattagcaaaaggagaagtttctggtttaacagaggagttccgacgttcagca
cagaatggcacaaagtggaaagcacagcctaatgctgagatcccagtgaaaacacggctc
agctcctggatggctttgcagctgccatggcaacaagagggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttcttatgctttactatggaggaatgaaaaca
gaactgtga
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