Geospiza fortis (medium ground-finch): 102033119
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Entry
102033119 CDS
T03755
Symbol
BCOR
Name
(RefSeq) BCL6 corepressor
KO
K23215
bcl-6 corepressor
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102033119 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102033119 (BCOR)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102033119 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
102033119
NCBI-ProteinID:
XP_014164061
LinkDB
All DBs
Position
Un
AA seq
1763 aa
AA seq
DB search
MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDADAPKSRLELREENHLNHSVVDATT
AHRIDSLAALSMDRSGLMREGLRVPSSIVYSSLCGLGSEKSRDAAGSIASLGFTPERNPE
IQFKSNPPEAVESAAVSGKAPNGFSAIYKTPPGIQKTSVPTGETLGLDRAAGDRQSPLGV
NGASYLRLPWVNPYMEGATPTIYPFLDSPNKYSLNMYKALLPQQSTYSLPQHLAYSPVCT
NGERFLYLPPSHYVAPHIPSSLASPMRLSTASASPAIPPLVHCPDKSLSWKMGVSPGTPV
DTHAYPHIQSSKQPRVPAAKPAPANLPGDPALLLPHSPRPSPRLPLPAQVGDAYADFHKH
FPRITTSPSSAVTLPKPYVNIGSEFPPARLSNGKLPKGSDAGEAPLPSAPHARKAGHDRK
DSRSPPLLEKQTPTKDVTDKPLDLSAKVVDAETAGKSDHSKKIMPTVLVHGRAGGGTHLP
GGDIVQKETISPGNSCPIYRPEIISTAPSSWIVPGPSPNEEAGKNVQLKNKALDWVMPQP
RSSSCPRMGGTEAVVGSVSGTVSAGGRPASASPAPNANVDCAKTARSSAESTASVIQHVG
QPVATPAAKHSSKVAKSCAQEANFKATETALASSPIFLPPNEAFRSPPLPYPRSYLPYPV
PEGIAISPLTLHGKGHVYPHPVLLPNGSLYPTHLAPKPGLPYSLPAGRGEFMTYQDALGV
GMVHPMLLQHSALEINKEEKTERRSRSHERVRYEDPALRGRLPELLESGGKMHFEMPGDK
SVKLHQNSGHSKNSAKSDKHLFPDLLRDEQEAKSEANVTKASFATESSNQTNDPTKHKVE
QASQHRDFIVMREEFGRNNDVHETYNFKQAQSSSVFGLRKEDLPVSQPKERVAVQPSPVF
LESAHESDAPALAFGKVQEDAKPFCMGTAPPSIDASQTYTKDGADDAESADGKTLKPKPS
KLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAM
MRFSELEMKEREGQTATKDSEVCRFSQADWENLKGNSEKKPKSVALEDAIADQNDNDRCN
FTSTENNRGHFLETPEEKDLSNEKCYLERHSVYEKAEDQPTEDFGQHSCPRLDRKRKHSG
ERVQNDGSQNEGFVDELQDEVISKAKKKKSSKDDWPEREMTNNSSNHLEEPNCNEVTNLK
VCIELTGLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVKDF
TEERHTKKRSEAKSNRSWSEESLKTSDNEQGLPVFPVSPHMKSLSSTNANSKRQAQPSCT
PASRLAAKQQKIKESRKTDGLYTDEEEDFQHASLMPKYSECEKPSGKRQCKTKHLALQER
RRRSSLTGDDTTDIENAEDKVSLFRFNCPPASEKAEPSHHSTVQTKIKNPLPSRFXQVTP
PQLPLASPGPESTPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLESKACDVN
HRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRPIHDAVENDHLEIVRLLLS
YGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRSVDDPGLYWDFYGSSVCDPKDE
SGFDVLANPPGPGDEDEDGFSDVFEFEFLDEPPLPCYNIQVCLSQGPRNWLLLSDVVKRL
KMSSRIFRCNFPNLEVVTITEAEFYKQTSLSQLFSCATDLEAFNPESKELLDLVEFTSEL
KTLLGSELHWLHPHEEPPFDILW
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaactcccctgtatggcaacgttcatagctggatgagcaatgaaagggtc
cgcatgtgtggaattaatgaagacaggaaaattcccgttaatgatgctgatgcaccgaaa
agcagactggagttgagggaggaaaatcacctgaaccacagtgtggtggatgcaactaca
gcacatcgcatcgacagcctcgcagctctgagtatggacaggtctgggctcatgcgagaa
ggactcagagtgcccagtagcattgtctattccagcttgtgtggacttggctcggaaaaa
tcgcgggatgctgcgggttccatagccagcctgggatttactcctgaaagaaatccagag
atacagtttaagtctaatcctcctgaagcggtggaaagcgcagctgtctctggaaaagcc
ccgaacggcttcagcgctatatacaaaacaccacctggaatacaaaaaacctctgtcccg
acaggggagacactgggtttggaccgagctgcgggtgacaggcagagtcccctcggtgtc
aatggtgctagttacctaaggctcccctgggtaaacccctacatggagggtgcaacgccc
accatataccctttccttgactcaccaaataagtattcgttgaacatgtacaaggcattg
ctacctcagcagtccacctacagcttaccacagcacctggcttactcgcccgtgtgtacg
aacggtgaacgttttttatacttgcctccctcccactacgttgcccctcacatcccttcg
tcgctggcgtcgcccatgaggctctcgactgcttcagcttctccagcgatcccacctttg
gtgcactgtccggataagagcttgtcgtggaagatgggtgtgagcccgggcacgcctgtg
gacacgcacgcctacccccacatccagagcagcaagcagccccgggtccccgccgccaag
ccggcccctgccaacttgccaggagatcctgcactcctgctgccgcactcgccccggcca
tctccccgcctccccctgcccgcccaggtcggggatgcctatgctgatttccacaaacat
ttccccaggatcaccacctctccctcctctgctgttacgctcccaaagccctacgtgaac
atcggcagtgaatttccacctgctcgcctctccaatgggaagcttcccaaaggcagtgat
gctggggaggcaccccttccatctgccccccatgcacggaaagctggccacgaccggaag
gatagcaggtctcccccactcctggaaaagcagaccccgaccaaagacgtcactgacaaa
ccgctggacttgtcggcaaaagtggttgatgcagaaactgctggcaagtctgaccacagt
aagaaaattatgccaacagtgctggtgcatggaagggcaggaggggggacacacttgcca
ggcggtgacatcgttcagaaagaaaccatttctcctgggaacagctgccccatctacagg
cctgaaattatcagcacggcgccatcctcctggatcgttcctggtcccagccccaatgag
gaggctgggaagaatgtccaactgaaaaacaaggcactggactgggttatgccacagcca
cggagctcctcctgccccaggatgggtggcacggaagctgtggttggcagtgtttcgggg
acggtgtcggcgggggggcggccagcgtcagcgtcaccggctcccaatgccaacgtggac
tgcgccaagacggcgcggagctctgcagagagcacggcctcggttatccagcacgtcggg
cagcccgtcgccacccctgctgccaaacacagcagtaaggtggccaagtcctgtgctcag
gaagccaacttcaaggcgaccgagactgccctggcctccagccccatcttcctgccgccc
aacgaggcgtttcgctcccctcctctgccctaccccaggagctacctcccatatccagtg
ccagaggggattgccatcagccctctcaccctccacgggaagggacacgtctaccctcac
cctgtcttgctgcccaacggcagcctctaccccacccacctggctcccaaacccggcctc
ccttacagcctgccagccgggaggggggagttcatgacctaccaggatgctctgggagtg
gggatggtgcaccccatgctgttgcagcattcagctctggaaatcaataaggaggagaag
acagaacggaggtcacggtctcacgagagggtccgctacgaggacccggctctgcggggc
cgattgccagagctcctggagagcggtgggaagatgcattttgaaatgcccggtgacaag
agcgtgaaattgcaccagaactctggccatagtaaaaactctgcaaaaagcgacaaacac
cttttcccggatcttctgcgagacgagcaggaagctaagagcgaagcaaacgtaacgaaa
gccagctttgctacagaaagcagtaatcagactaatgaccctacaaagcacaaggtagag
caggcgtctcagcacagagattttattgtaatgagagaggagtttggaagaaataatgat
gttcacgaaacctataatttcaagcaagcccagagttcatcagtgttcggcttaaggaaa
gaagatttacctgtgagccagcctaaagagagagtggctgtccagccttctcctgttttc
ttggaaagcgcgcacgagagcgatgctccagctctggcttttggcaaggtgcaggaggac
gcgaagccattctgcatggggaccgcgccgccgagcatcgatgccagccagacctatacc
aaagacggagccgacgatgcggagtctgccgacggcaaaacgctgaaacccaagccgtcc
aaactggccaagaggatcgcaaactctgccggttatgtaggtgaccgattcaagtgtgtg
accaccgagctctacgccgactccagccagctcagccgggagcagcgggcgttgcagatg
gaaggattacaagaggacagtattttatgtctacctgctgcttactgtgagcgagcaatg
atgcgcttctcagagttggagatgaaagagagagaaggccaaacagctaccaaagactca
gaggtctgcagattcagccaggcagattgggaaaacttgaaaggaaacagtgaaaagaag
ccaaagtctgttgctctggaagatgccattgctgaccaaaatgacaatgacagatgtaac
tttactagtacagaaaacaaccgaggtcactttcttgaaactccagaggaaaaagatctc
tcaaatgagaaatgttatttagagagacattctgtgtatgaaaaggcagaagaccagcca
acagaagattttggccaacattcatgtccacgtctggacaggaaacgtaaacactctggt
gagagagtgcaaaatgatggcagccaaaatgaaggctttgtggatgaactgcaggacgaa
gttatatcaaaagcaaaaaagaagaagagctccaaagatgactggcctgagagggaaatg
acaaacaattcctctaaccacttagaagagcccaattgtaatgaggtgaccaacctgaag
gtgtgcattgaattaacagggctccatcccaaaaagcagcgtcacctgcagcatcttagg
gaactatgggagcagcaggtgtcaccagagagatccccgtccggcaagttgggccggcaa
agcaggaaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaagacttc
acagaagaaaggcacaccaagaaaaggtcagaggccaaaagcaatagaagttggtctgaa
gagtccctcaaaacaagtgacaatgaacaaggcttgcccgtgttcccggtgtctccgcac
atgaagagcctttcatccaccaatgcaaacagcaaaaggcaggctcagccaagctgtact
ccagcctcgaggttggctgccaaacagcagaaaattaaagaaagccggaagacagatggg
ctgtacacagacgaagaggaggatttccaacatgcatctctgatgccgaaatacagcgag
tgtgagaagccatcagggaaacgtcagtgtaaaacaaaacacttggcactgcaggagagg
agaaggaggtcatctctgacaggggatgacaccacagatatcgaaaatgctgaagataag
gtatctttatttagatttaattgtccaccagcctctgagaaggcagagccatcccatcac
agtactgtgcaaacaaagataaaaaaccccctgccatcacggttttgacaggtcacgccc
ccgcagctgcccctggccagccccggcccggagagcacccccagccggcccatgccgccc
gaggcacggcgcctcatcgtcaacaagaacgcgggggagacgctgctgcagcgcgcggca
cgcctgggctatgaggaagtggttctgtattgtttggaaagcaaggcgtgtgacgtgaac
caccgtgacaacgcgggttactgtgccctgcacgaggcctgtgcccggggctggctgagc
atcgtgcggcacctcctcgagtacggcgcggacgtcaactgcagcgcccaggatggaacc
agaccaatccacgacgcggtggaaaacgaccacttggaaattgtccgcctgttgctgtcc
tatggtgctgatccaacacttgcaacctactctgggaggaccatcgtgaaaatgacccac
agtgagctcatggagaccttcctcacagagtatttaactgacctgcaaggtcgaagtgtg
gatgaccctggtttgtactgggatttctatggcagctctgtgtgcgatccaaaagatgaa
tctggatttgatgtcttggcaaatcctcctggcccaggtgatgaagatgaagatggcttc
agtgatgtgtttgaatttgaatttttggatgagcctcccttaccgtgttacaacatccaa
gtgtgtctctctcagggaccacggaactggctcctgctctcggacgtggtgaagaggcta
aagatgtcctcgcgcatcttccgctgcaacttccccaacctggaggtcgtcaccatcaca
gaggcagagttttacaaacagacttccctcagccagttgttctcttgtgctacggacctt
gaagcttttaacccagagagcaaagagctcttggacttggtggagttcacaagtgagctc
aagactctgctgggctccgagctccactggctgcacccgcacgaggagcctcccttcgac
atcctctggtga
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integrated database retrieval system