Geospiza fortis (medium ground-finch): 102033183
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Entry
102033183 CDS
T03755
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102033183 (ASCC3)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102033183 (ASCC3)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
102033183 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ASCC3_N
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
102033183
NCBI-ProteinID:
XP_014166095
LinkDB
All DBs
Position
Un
AA seq
2186 aa
AA seq
DB search
MALPRLTGALRSFSNVTKHEDYSEELADLTTKRSKLHAQLLKSDLTWKKIIKFVDDNLDK
KEYQTVNGDLKTILQAAKQIVGAENGQEAIESGAVFLFKTFHGKECVGHDETKVIKQMFG
PFPSSSATAACSATSRIASHFTEEQLTALIQLAEEQNGDNRVLFGKNIVFSFDMHDLDHS
EELPVNGETDVQKSISLDYNKFLNNQLNHLQNYCDGKSNIKSLEKIDDSFLWCEVGKYLK
ESQGGNPGGPTTEDLCCTLYEILASTKSADELQNELFELLGPEGFELIEKLLQNRSLILE
RSLTCPNDNRFQALQEQCKKFIGENAKPNYGCQVTIQSEQEKLLMKQYRREEKRNARKEK
QAVEDGEGSGEGQMCFDPKELRMQRELALLNARSMPVLGRQREMSVEKIHYPHVYDSRAE
AMKTSAFIGGAKVFLPESVQRENNKMYEEVKIPHSEPMPIGIEEKIVYIKDLDEIGQLAF
KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTILHEIRQHVQHGVIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYESVLKQ
IMAGHQVMVFVHARNATVRTAMALREKAKNNGHICHFLSPQGSEYGQAEKQVQRSRNKQL
RELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIY
AAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFL
ESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHRE
QLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDI
LAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISRGEMD
SFSLISDSAYVAQNAARIVRALFEIALRKRWPSPLRQFSVLPPSVLSKLEEKNLTIDKMK
DMRKDEIGHMLHHVKIGLKVKQCVHQIPSIIMEATIQPITRTVLRVRLNIAPDFTWNDQV
HGSVGEPWWIWVEDPTNDHIYHSEYFIIQKKQVITKEPQLLVFTIPIFEPLPSQYYIRAV
SDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGHPEYEVLYKFTHFNPIQT
QIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERIEDW
KVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVAILII
DEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNINQMGLFN
FRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTA
LDLIAFLATEDDPKQWLKMDEREMNDIIVTVRDSNLKLTLAFGIGMHHAGLHERDRKTVE
ELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGR
PQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVLADHLNAEIAAGTITSKQDAMD
YITWTYFFRRLIMNPTYYNLDDVSHDTMNKYLSSLVEKSLFDLEGSYCIEVGEDNRSIEP
LTYGRIASYYYLKHPTIGMFKEQLKPESNIEELLLILTNADEYTDLPVRHNEDQMNSELA
KHLPIEVNPHSFDSSHTKTHLLLQAHFSHAMLPCPDYATDTKTVLDQAIRICQAMLDVAA
HHGWLVTALNITNLVQMVVQGRWIHDSSLLTLPNVELQHLYLFRKWSQGQRKSVHGGYQG
PIECLPELMAACEGKENVFASIVDSELPAAHISQAWNFLCRLPILNVSLSIKGSWDDAVQ
PQNEVPVPSWTTDTRDDKRWIKLHADQEYVLQINLHRTQMGYQGKQDSKAMAPRFPKVKD
EGWFLILGEVDKKELIALKRTGYVRNRNTVSVAFYTPETPGKCIYTLYLMSDSYLGMDQQ
YDIYLNIVPAQGTTEGTEARSHLALK
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcctcgtcttacaggcgctttacgctccttttcaaatgtcactaaacatgag
gattacagtgaagaattagctgacttaacgactaaaagatcaaaactacatgcccagttg
ctgaagtccgatcttacttggaagaagataataaagtttgttgatgacaatttggacaaa
aaagaataccaaactgtaaatggtgatttaaaaactatcttacaagctgcaaaacaaata
gttggagctgaaaatggacaagaagcgattgaaagtggagctgtttttctttttaaaaca
tttcatgggaaagaatgtgttggccatgatgagacaaaggtgatcaagcagatgtttggg
ccatttccatcatcatctgctactgcagcttgtagtgccacgtctcggattgcttctcac
tttactgaagaacagcttacagccctcatacagttggctgaagagcaaaatggtgataac
agagtgctgtttggtaaaaatatagtgttttcatttgacatgcatgatttggatcactct
gaagagctgcctgtgaatggtgagactgatgtgcagaaaagtataagcttagactataac
aagtttttgaataaccagctgaatcacttacagaactattgtgatgggaaatctaatatc
aaatctttggaaaaaatagatgattcttttttgtggtgtgaagttggaaagtacctgaag
gagtctcaaggaggtaaccctggagggccaacaacagaagacctctgctgcactttgtat
gagatccttgcttctaccaaaagtgccgatgaacttcaaaatgagttatttgagctgctg
ggccctgaaggttttgaactcatagagaaactcctacagaacagatctctgattctggaa
agatctttgacttgtccaaatgataacaggttccaggctctccaagaacagtgcaagaag
tttataggagaaaatgctaaaccaaattatggttgtcaagtcacaattcagtctgaacaa
gaaaagttgttaatgaagcaatatcgtcgggaagaaaaacgaaatgccagaaaagaaaaa
caagctgtggaagatggagaaggttctggagaaggacaaatgtgctttgatcccaaagag
ctgcggatgcaaagagaactagcgcttctgaatgctcgaagtatgccagtcctaggtaga
cagagagagatgagtgtcgaaaaaattcattatccacatgtctatgattcccgagctgaa
gctatgaaaacatcagcattcattgggggtgcaaaggtgttcttaccagagtcagttcag
cgagaaaataataaaatgtatgaagaggtgaagatcccccatagtgagccaatgcctatt
ggtattgaagagaaaattgtttatattaaagatttagatgagattggacaacttgctttt
aaaggcatgaaaaggctaaaccgaatccagtctatcgtttttgagactgcctacaacaca
aacgagaacatgctgatctgtgcccccactggagctgggaagactaacattgccatgctg
acaatccttcatgaaattcgccagcatgtccagcatggtgttatcaaaaaggatgagttc
aagattgtgtatgttgctcctatgaaggctttggcagccgaaatgacaaattacttcagc
aagcgtctggaaccacttggcattactgtgaaagagctgactggtgatatgcaactgtca
aaaggcgaaattctgcgaacacagatgcttgtgactactccagagaaatgggatgtagtg
acaaggaaaagtgttggtgatgtagccctctctcagctggtaaaactcttgattcttgat
gaagttcatctactgcatgaagacagaggaccagtactcgaaagtatagtagcacgtact
ttacgacaggttgaatctacacaaagcatgattaggattttgggcctttcagctacatta
cccaattatcttgatgttgctacatttctacacgtcaatccctacattggattattctac
tttgatggccgtttccgacctgtacctctgggacaaacctttatagggatcaagacaacc
aataaggtgcagcagctgaatcatatggatgaagtatgttatgaaagtgtgctgaagcaa
ataatggctggacaccaggtcatggtgtttgttcatgctagaaatgctacagtacgaact
gctatggctcttcgagaaaaagcaaaaaacaatggtcatatttgtcacttcttgtcaccc
caagggtcagaatatggacaagctgaaaaacaggtacagagatccagaaataagcagcta
cgtgagctgtttccagatggatttagtattcatcatgcgggaatgctgcggcaagacaga
agtttggttgagaacttgttttctaatggacatatcaaagtcttggtttgtacagctaca
cttgcttggggtgtcaatctgcctgctcatgccgttgttattaagggaacacaaatatat
gctgcaaaaagaggctcctttgttgaccttggaattttagatgtcatgcagatatttggt
cgagctggacggcctcagtttgacaaattcggagaaggcatcattattacaactcatgat
aaactcagtcattacctgactcttcttacacagcagaacccaattgaaagccagtttctt
gaaagccttgcagacaacttaaatgcagagattgctcttggcacggtaactaatgtggaa
gaagcagtaaagtggataagttacacttatctttatgtacggatgagagcaaatccatta
gtatatggcatcagtcacaaagcttatcagatggatccaggtctagaaaagcacagagaa
caattggtgattgaagttggcagaaaactggacaaagctcgcatgattcgctttgaagaa
cggactggctttttttcttcaacagatttaggcagaactgccagccactactatattaaa
tacaatactatagagactttcaatgaattgtttgatgctcataaaactgaaggcgacatt
cttgctatagtatcaaaagctgaagagtttgaacagataaaggtaagagaagaagaaata
gaagagctagataccttactaaatgatttctgtgaacttcctgctccaggaggtgtggaa
aacaattatggaaaaattaatatcctccttcaaacatacattagcagaggggagatggac
agcttctcccttatttcagattctgcatacgttgcacagaatgcagctcgtattgttcgg
gctctttttgagattgccctgaggaaacgttggcctagccctctgaggcagttctcagtg
ctaccaccgtccgtcctctccaagctggaagagaagaatctcaccattgacaagatgaag
gacatgagaaaagatgaaataggtcatatgctgcatcatgtgaaaattgggttaaaggta
aaacagtgtgtccatcaaataccctccatcatcatggaagcaacgatccagccaatcacc
cgcaccgtgctccgagtccggctgaacatcgcgcccgacttcacctggaatgaccaggta
catggcagtgttggagagccctggtggatttgggtagaagaccctactaatgatcacatt
tatcattcagagtacttcatcattcaaaagaaacaggtcattactaaagagcctcagctg
ctggtgttcacaatcccaatttttgaacctcttccttctcaatattacattcgagctgtg
tctgatagatggttaggagcagaggctgtatgtatcataaattttcaacatttgattctt
ccagagagacatccaccccacacagagcttctggatctccagcctttgcctatcacagcc
ttgggacatcctgaatatgaagtcctgtacaaattcacacacttcaaccctattcagaca
cagatattccataccctctatcacacagactgcaatgttcttcttggagctcctacaggt
tctggaaaaacggttgcagctgaattagccatctttagagtttttaacaagtatcccaca
tcaaaggcagtgtacattgcacccttgaaagcactcgtccgtgagaggattgaggactgg
aaagttaggattgaagaaaagcttggtaaaaaggttgtagaattgacaggagatgtgact
cctgatatgagagctattgcccaggctgacctgattgttactaccccagagaagtgggat
ggtgtcagcagaagttggcagaacagaagctatgttcaaaaagttgccattctcatcata
gatgagatccatcttctaggggatgagagaggcccagtgttggaagtcattgtgtctcga
acaaactttatctcatctcacactgagaagccagtaagagtggttggtttatccactgct
ttagcaaatgccagagaccttgctgactggctaaacattaatcagatgggtctgttcaac
ttccgaccatcggtgcgcccagttcctctggaggtgcacatccagggcttccctggccag
cattactgtcctcgcatggccagcatgaacaaacctgcttttcaggcaattcggagtcat
tctccagccaagcctgttcttatttttgtgtcatccagacgtcagacaaggcttactgcc
ttagatctcatagctttcctggccacagaggatgatcccaaacaatggctgaagatggat
gaaagagagatgaatgacattatagtcacagttagagattcgaatctgaagctgacactt
gcttttggaataggcatgcaccatgcaggtctacatgaaagggacaggaaaactgtggaa
gaattgtttgtgaactgcaaaatccaggttcttattgccacaagcacattagcttggggt
gtgaattttccagctcatttagtaattgttaaaggaacagaatactacgatggaaaaaca
aggcgttacgtggattatcccattacagatgtgcttcagatgatggggcgtgctggcaga
ccacagtttgatgaccaaggaaaagctgtcattctggttcatgatattaagaaagacttc
tacaaaaaattcctttatgaacctttcccagtggaatcaagcttgttagaggtgctagct
gaccacttgaatgctgaaattgctgctggaactattacatctaagcaggatgcaatggat
tatatcacctggacttacttcttccgtcgacttataatgaacccaacttactataacttg
gatgatgtgagccatgacactatgaacaagtacctctcaagccttgttgagaaatccctg
tttgatttggaaggctcctactgtattgaagttggggaggataatcgcagcattgagccg
ctgacgtacggccgtattgcctcctattactatttgaagcatccaactattgggatgttc
aaggagcagttgaaacctgaaagcaatattgaagaactgctcttaattctgacaaatgct
gacgagtacacagatctgcctgtgagacacaatgaggatcagatgaacagcgaactggcc
aaacaccttccaattgaagtcaatccccattcatttgacagttcacacacaaaaacacac
ctcttgctgcaagcccacttcagtcatgccatgctgccttgcccagattatgcaactgat
acaaagacagtgctggaccaagcaatcagaatatgccaggcaatgctggatgtagcagca
catcatggctggctggtgactgctctgaacataaccaacctggtgcagatggtggttcag
ggtagatggatacatgactcatccctgcttactttgccaaatgtagagctccagcatctt
tacctttttcggaagtggagccaaggccaaaggaagagtgtgcatggaggttaccaagga
cctatcgagtgtcttcccgaactaatggctgcctgtgaaggaaaagagaatgtttttgct
tccattgtggacagtgagttgccagcagcacacatttcacaggcttggaatttcttgtgc
cgtttgccaattctaaacgtcagtctgagcattaagggcagttgggatgatgcagttcag
ccgcagaatgaagtacctgttccttcttggacaacagacacacgagatgataagagatgg
atcaaactgcatgctgatcaagagtatgtgctccaaataaacctgcacagaacccagatg
gggtaccagggaaagcaggacagtaaagcaatggctcctcgattccccaaagttaaggat
gaaggatggtttttgatattgggagaagttgataaaaaagaacttatcgccctgaaaaga
actggatatgtcagaaatcgaaatactgtttccgttgctttttatactccagaaactcct
ggaaagtgtatctacaccctgtatctcatgagcgacagctaccttggcatggaccaacag
tacgacatttacctgaacattgtgccagcacaaggcaccacggaggggactgaggccagg
agccacctggccctgaagtaa
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integrated database retrieval system
