Geospiza fortis (medium ground-finch): 102033207
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Entry
102033207 CDS
T03755
Symbol
WDR82
Name
(RefSeq) WD repeat domain 82
KO
K14962
COMPASS component SWD2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102033207 (WDR82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102033207 (WDR82)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102033207 (WDR82)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102033207 (WDR82)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
102033207 (WDR82)
COMPASS/SET1 complex (yeast)
102033207 (WDR82)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
VPS8_N
NBCH_WD40
Beta-prop_NWD2_C
PEP5_VPS11_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
102033207
NCBI-ProteinID:
XP_014163071
UniProt:
A0A6I9ZA69
LinkDB
All DBs
Position
Un
AA seq
277 aa
AA seq
DB search
MVDVIGKGLLEETHAFSRPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHD
NKYIRYFPGHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFD
PEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGG
FIRLIDAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAV
LDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgtcataggaaaaggacttttggaggagacacatgcatttagcagaccaaag
aggaccctatacagtaaaaagtatggagtggacctcatcagatacacacatgctgccaac
actgttgtgtacagctccaacaaaatagatgacacaatccgatacctctccctccatgac
aacaaatacattcgctatttcccagggcacacaaaaagggtggttgctctttcaatgtct
ccagtcgatgatacgtttatttctggatctctggataaaactattcgtctctgggatctc
cgctctccaaattgccagggtttaatgcatctccaagggaagccagtgtgttcttttgac
ccagaagggttgatttttgctgctggagtcaattctgaaatggtgaagctttatgatctg
cgttcttttgacaaggggccatttgctacgtttaagatgcaatatgaccgaacatgtgag
tggacaggcctgaagttcagcaatgatgggaaactcatcctcatctccaccaacggcggc
ttcattcgcctcatcgatgccttcaaaggggctgtcttgcacacgtttgggggttataac
aatagtaaggctgtcacgctggaggcatcattcacaccagactctcagttcatcatgata
ggttcagaggatgggaagattcatgtttggaatggagaaagtgggatgaaggtggctgtc
ctagatggaaaacacacaggtcctataacctgtctgcagttcaatccaaaattcatgact
tttgctagtgcatgttccaatatggccttctggttgccaactattgacgactaa
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integrated database retrieval system