Geospiza fortis (medium ground-finch): 102033228
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Entry
102033228 CDS
T03755
Symbol
FBXO18
Name
(RefSeq) F-box protein, helicase, 18
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102033228 (FBXO18)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102033228 (FBXO18)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102033228 (FBXO18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
F-box
Viral_helicase1
AAA_19
UvrD_C_2
AAA_30
AAA_12
F-box_4
ResIII
Motif
Other DBs
NCBI-GeneID:
102033228
NCBI-ProteinID:
XP_005427028
LinkDB
All DBs
Position
Un
AA seq
851 aa
AA seq
DB search
MDPIPELEVEPLPDPHYGLLGTRSWQLPQGSMDDLPPEILRNIFAFLPVVDLYQNLSLVC
RCWREIIRDPRFIPWKKLYHQYLKREESALQRVEQILQEFSITQEQQGCVLGLLRLVSST
GPKVHPSTLLQVLGSHPLFPKAQFCVLSKFPELHSKPGAEKMWAIFAVMVLFSDGVGDIQ
KLLGCFRSPRSELALLEVTEVLHCMATLLLAMRNKSIPISNRLHYNIFYCLYLMENASGT
VQPLEEGRMDLCPSGWADVTLTHEQQRILSHKIEPGQTVKIMAFAGTGKTSTLVKYAEKF
SELKFLYLTFNKAVAEKGKMVFPRNVTCKTFHSLAFGSIGRHYKEKGKLNFSKMSVYSIS
FLLRNREGQSLFVRGKTVSQTLGNFFSSSDEEICEEHVPLWFKNTHGHMEQVSPQEKRIN
VEEAKEIWHNMKKLDGDVEKKYKMTCDGYLKLWQLSKPQLSGYHAIFVDEAQDCTPAIVD
IVQSQNCGKILVGDPHQQIYTFRGAVNTLYLVPHTHVYYLTQSFRFGPEIAYVGATILDV
CKGIRSKTLLGGNQRGDVRGARQGKVALLSRSNWTVFEDAVEFSGRDPPAKIHVIGGLER
FGLSRISDIWKLSLPADVRKNSKLEIEDPFIRRWAESEGLAGLKEFAARVDDRELEVKIS
IVEKYRDSIPALVSRIRASHVSQEALADFLIGTVHQAKGLEFDTVCVADDFVQIPSVSGA
FLRRMNIALDRTPEDEWNLLYVAVTRAKKCLLMSKSLENLLSLAGERFLRVELLSEAGKD
KDGAPVACCVPGCTKSLEVTSGLVVKKLPLTHSDSSQDPGGFLCQACTWLFFGSLTPLTS
VPTIQXEPIQL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatcccagagctggaggtggaaccccttcccgatccccactacggcctcctg
ggcactcggagctggcagcttcctcagggatccatggatgatcttcctcccgaaatcctc
aggaatatttttgctttcctgccagttgtggatctgtaccagaacctgagcctggtgtgt
cgctgctggagggagataatccgggatccacggtttatcccttggaagaagctctaccac
cagtacctgaagagggaggagtcagccctgcagagggttgagcagatcctgcaggaattc
tccataacccaggagcagcagggctgtgtgctgggcttgctcaggttggtgtcatccaca
gggcccaaggtgcatcccagcacgcttctccaggttctgggaagccatcccctcttccca
aaggctcagttctgtgtcctcagcaaattccccgagttacacagcaagcctggggcagag
aagatgtgggccatctttgctgtcatggtgctgttctctgatggtgttggtgacatccag
aagctcctgggatgtttccggagcccccgctcggagctggccctgctggaggtcaccgag
gtgctccactgcatggccacgctgctcttggccatgaggaacaagagcattcccatctcc
aacaggcttcactacaatattttctactgcttgtatctgatggaaaatgcctctggaact
gtgcagcctctggaagagggaagaatggatttgtgtcccagtggatgggctgatgtcaca
ctgacccatgaacagcagaggattttgagtcacaaaattgagcctggccaaacagtgaaa
ataatggcatttgcaggcacagggaaaacctcgaccttggtgaagtacgcggagaaattc
tcggagctgaaattcctttacctgacttttaacaaagctgtggcagagaaggggaaaatg
gttttcccaaggaatgtcacctgcaagaccttccactccttggcttttggaagcattggg
agacactacaaagagaaaggcaagctgaacttctccaagatgtctgtttattccatcagc
ttcctcctccggaacagggagggccaatccctgtttgtaagagggaaaactgtgtcccaa
accttgggaaacttcttctcctcctcagatgaggagatctgtgaggagcatgtgcccctg
tggttcaaaaacactcatggacacatggagcaagtgagcccacaggaaaagaggatcaac
gtggaagaggccaaagagatttggcacaacatgaagaagctggatggagatgtagagaag
aaatacaagatgacttgtgatggatatttgaaactttggcagctcagcaagccccagctc
tcgggataccatgccatttttgtggatgaagcccaggattgcaccccagccatcgtggat
attgtgcaatcccaaaactgtgggaaaatcctggtgggagacccacaccagcagatctac
accttccgaggggccgtcaacaccctgtacctggtgcctcacacccacgtgtactacctg
acccagagtttcaggttcggccccgagatcgcctacgtgggagccacgatcctggatgtg
tgcaaagggatccgcagcaaaaccctgctgggagggaaccagaggggggacgtgcgggga
gcccggcaggggaaggtggcgctgctgtcccgcagcaactggaccgtgtttgaggacgcc
gtggaattctctgggagagaccccccggccaaaatccacgtcattggggggttggagaga
tttggcctgagcagaatttctgacatttggaagctcagcctgcctgcagatgtcaggaaa
aactcaaagctggagattgaggatcccttcatcaggagatgggccgagtccgagggcctg
gcggggctgaaggaattcgcggcgcgcgtggacgaccgagagctggaggtgaagatttcc
atcgtggagaagtacagggacagcatcccggcgctggtgagcaggatcagggccagccac
gtgtcccaggaggccctggcagattttctcatcgggaccgtgcaccaagccaagggcctg
gagttcgacaccgtttgtgtcgcggatgattttgtgcaaatcccttctgtcagtggggct
ttcctgaggagaatgaacattgctctggacaggacccctgaggacgagtggaacctgctc
tacgtggccgtgaccagagccaagaagtgcctgctgatgtccaaatccctggaaaacctt
ttatctctggctggagagcgtttcctccgggtggagctgctcagtgaggctgggaaggac
aaggatggagctcctgttgcttgttgtgtgccaggatgtacaaaatccctggaagtcacc
tctgggctggtggtgaagaagctcccgttgactcacagcgacagcagccaggatccaggg
ggattcctttgccaggcttgcacctggctgttcttcggctccctgacaccactcacctct
gtcccaacgatccagtaggagcccatccagctctaa
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