Geospiza fortis (medium ground-finch): 102033260
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Entry
102033260 CDS
T03755
Symbol
TMC3
Name
(RefSeq) transmembrane channel like 3
KO
K21988
transmembrane channel-like protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102033260 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102033260 (TMC3)
03037 Cilium and associated proteins [BR:
gfr03037
]
102033260 (TMC3)
Transporters [BR:
gfr02000
]
Other transporters
Pores ion channels [TC:
1
]
102033260 (TMC3)
Cilium and associated proteins [BR:
gfr03037
]
Other cilia and associated proteins
Stereociliary proteins
102033260 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TMEM43
Motif
Other DBs
NCBI-GeneID:
102033260
NCBI-ProteinID:
XP_005419666
UniProt:
A0A6I9HEV9
LinkDB
All DBs
Position
Un
AA seq
1113 aa
AA seq
DB search
MAAAPGSPAPRAAKSCKKQRTVKRQTGIYTYQEPPHSNSEDDAGEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRVLRQAKEIVLKYEGRLTRTRGYQAAGAELWKKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTLSKTIPKEHIASAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQRLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNNNASNSTTSLATNTLSKDDNVTIPNVQIKRNGFVMSEEHRTQGLT
DSLVNRTMSFNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCVRYLSDC
WCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAV
LTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEKIYDI
VSETIQNDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRMKIQT
ERTEDKKKVVQMAVARIQNLDANDKRPEQETDIISQESSARSSTPRKNGSVLNFESPVSK
GTRIQTISQSVPQAVPTTDVVRPANATPTTSTSLTPAPSVSSVQKPRNDHITNRYPSVVH
RSASELCKTKPYTPVTFKKHTEDVHSDPLFRKAIRQVNSDALGAGAPVFLGYRPYATRYF
LVNEKESRKKSLRSTSRLQRHFRKEEAGDIIELYPRHVRRYVVRTPHQMYSPHPSEDEED
EEELEKEFITRSHRPRSLSDLRPASRFYIGDRADGHILMSKDLARVHYKSWDDGFELDLD
RPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSISIESSSDPQNSSNDQYIQVIHTKD
KYPKTGAKLAKKKSKNSVDLSMSEPSELVCSNV
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctccaggctcccctgcacccagagctgccaagtcctgcaagaagcagcgc
acggtgaagcggcaaactggcatctacacctaccaggagcctccccacagcaactcagaa
gatgatgctggtgaagagaaggctgagagccatgacccagagcagatctttcagaacatc
cagtaccagaaggagattatgtccaacatccgctgccggccgtggcccatgaggcagaag
ctgagggtgctcaggcaagccaaggagatcgtgctcaagtacgaggggaggctcaccaga
acgagagggtaccaggctgctggggcagagctttggaagaagtttattcgacttgcatac
aattttgtggtaatatttattccttgggaaatgagaataaagaaaattgaaagtcatttt
gggtctggcgttgcctcttacttcatcttcctgagatggctgtttggaatcaatattgtc
ctcaccataatgacaggagcatttgtagtcctaccagagctcctggccggagccccgttt
ggcagcacactcagcaagaccattcccaaggagcacattgcatctgctcaagacctggac
accatctggtccctagggggctacctccagtactctgttctgttttatggctattatggc
cgggacaggaagattgggaaagctggataccggctgcctcttgcctacttccttgttgga
atggctgtgtttgcttacagcttcatcatccttctaaaaaaaatggcaaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgctggagactgttctgtgct
tgggactatttgataggaaaccctgaggctgcagagagcaaagctgctgccatagtcaac
agcatcagggaagctatattggaagagcaggaaaagaagaaaagcaaaaacttggcagtg
accataagcttaagaattattgcaaacatcctcgtgcttctgtcccttgctggaagtatt
tacatcatctactttgttgtggatcgatcccaaaggttggagcgcaccaagaaggaattg
actctttgggaaaaaaatgaggtcagtgtagttgtgtcactgatcacaatgattgcaccc
tctgcttttgaacttgttgcagctctggagatgtatcatccaaggaccactcttcgcttc
cagcttgccagggttcttgtcctatacctgggaaacctctacagtttaattattgccctc
ctggataaagtggacagtatgagtgtcactgactctgatgtgaacaacaatgcaagtaat
tctaccacctccttagcaaccaacactctttctaaggacgacaatgtaaccattccaaat
gtacaaattaagagaaatggctttgtcatgtcagaagagcatcgcacccaaggcctgaca
gactcactggttaaccgaacaatgtcctttaacacccagaacccacaggatcagtgctgg
gagacatatgttggtcaagagatgctcaagctttcaattatcgacatgattttcacagtc
gcaagcatcctgctaattgactttttccgtggactgtgtgtccggtatctgagcgattgc
tggtgctgggatctagaaagcaagtttccagaatatggagaattcaaaatcgcagagaac
gtattgcatttggtctacaaccaaggaatgatctggatgggagctttcttttcaccttgc
ttaccagcattcaatgtactcaagttgattggactcatgtacctgaggagctgggctgtg
ctcacatgcaatgtaccccatcagcaggttttcagagcatctcgatccaataatttctac
ttggccatgttgctgtttatgctgttcttgtgcatgttaccaacaatttttgctattgcc
cgatataagccatccttaagctgcggccccttcagtggccaagaaaaaatatatgatatt
gtttctgaaacaattcaaaatgattttcccacatggttcaacacagtgattacttacatc
agcagtcctgtggttgtcctccctgcactactactgttattcatgctcatctactaccta
caaagtattgcaagatcattaaaattcaccaacaatcaactgagaatgaagatacaaaca
gaaagaactgaagataagaaaaaggtggttcagatggcagtagccagaatccaaaatctg
gatgctaatgacaaaagaccagagcaagaaactgatatcatcagccaggagtcttctgct
cggtcctcaacaccccgaaagaatggcagtgtcttgaactttgaatctcctgtgagcaaa
ggcaccagaatacaaaccatttcccagtctgtgccccaagctgtgccaacaactgatgtt
gtgagacctgccaatgcaactcccacaacttcgacctctttaacaccagctccctctgtg
tcaagtgtacagaaaccaagaaatgatcatatcacaaacagatacccaagtgttgttcat
aggagtgcaagtgagctgtgcaaaacaaagccgtacacaccagtgactttcaaaaagcac
actgaagatgttcattctgaccctctcttcagaaaagccattcggcaggtaaattcggat
gcccttggggcaggggctcctgtatttttgggatacagaccatatgctaccaggtatttt
ctggttaatgaaaaagagtcccgcaaaaaatcgcttcgttctacctcccgactccaaagg
catttcagaaaggaggaagcaggagacattattgagttgtatccacgccacgtcagaaga
tacgtggttcgaacaccacaccagatgtattctccccatcccagtgaagatgaggaggat
gaagaagaacttgagaaagaattcataaccagatcccatcgccctcggtcactgtctgac
cttcggccagcatcacggttttacattggggatcgtgctgatggccacattctaatgagc
aaagatctagccagagtgcattacaagtcctgggatgatggttttgagctggacctggac
aggcctccgtatgcttacaagaaagtacacctgaactatcctgagccacgtgtgaaacca
aaatcaaagcaaaagctggagcaatctctaacagagtctgattccatttccattgaatcc
agcagtgatccgcagaacagcagcaatgaccaatacatccaggtcattcataccaaggac
aagtatccaaaaactggggcaaaacttgccaaaaagaaatctaaaaacagtgttgatcta
agtatgtctgagcctagtgaactggtatgctcaaatgtctga
DBGET
integrated database retrieval system
