Geospiza fortis (medium ground-finch): 102033300
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Entry
102033300 CDS
T03755
Symbol
PAXBP1
Name
(RefSeq) PAX3 and PAX7 binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102033300 (PAXBP1)
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102033300 (PAXBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
102033300
NCBI-ProteinID:
XP_005429792
UniProt:
A0A6I9HSM5
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Position
Un
AA seq
812 aa
AA seq
DB search
MLSNFSFKETEEVFKVKKSSYSKKIVKQLKKEYKEDLEKSKVRTEVNSPTDVEAPPEKIG
QNKDIGQEDGTANSEHGEEEMEVESEKEEEKPKAGGAFSSALSSLNVLRPGEIPDAAFIH
AARKKRQMARELGDFTPVDSEPGKGRLVREDENDASDDEDDDEKRRIVFTVKEKSQRQKI
AEEIGIEGSDDEALVAGEQDEELSRWEQEQIRKGINIPQVQPSQPAEVNNVYYQNTYQTL
SYGSSYGIPYTYAAYGSSETKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKEM
HKANRQQYEKHQQSQEDSTKAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLI
NELESAMHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRVIYQEQV
KRRTAEREARRARRRQAREQTGKMADHLEGLSSDDEETSTDITNFNLERDRILKESSKVF
EDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLFNPLIRLQLLTWTPLEGKCR
DFETMLWFESLLFYGCEEQEQVKDDADISLLPTIVERVVLPKLTVISENIWDPFSTTQTS
RMVAIVQKLIDGYPSVVNAENKNTQMLLKALLLRMRRTLDDDVFMPLYPKNILENKNSGP
YLFFQRQFWSSVKLLGNFLQWYGILSNKTLQELSIDGLLNRYILMAFQNSEYGEDSIKKA
QSVIACFPKQWFANLTGDKTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNAREHIKQI
IKLLASIRALDHAITVANDHNVKEFKILIEGK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgttatccaatttctcttttaaagaaacagaagaagttttcaaagtgaagaaatcaagt
tacagcaaaaagattgtaaaacaattgaagaaagaatacaaagaagaccttgaaaaatca
aaagttagaacagaggtcaattctccaacagatgttgaagcaccaccagaaaagatagga
cagaataaggatataggccaagaagatgggactgcaaacagtgagcatggtgaagaagaa
atggaagttgaaagtgagaaggaagaagaaaaaccaaaagctggtggtgctttttcaagt
gctctgtcatcactgaatgttctccgcccaggagaaattccagatgctgcttttattcac
gccgctaggaaaaagcgccaaatggctcgtgagcttggagactttacccccgttgacagt
gaaccaggtaaaggccgccttgttcgagaagatgaaaatgatgccagtgatgatgaagat
gatgacgagaagaggaggatagtttttacagtgaaggaaaaatcccaaaggcaaaagatt
gctgaggaaataggtattgagggaagtgatgatgaagcactagtggcaggggagcaagat
gaagaactcagtagatgggagcaagagcagatacgaaaaggaatcaacataccccaggtt
caaccaagtcagcctgcagaagtgaataatgtgtactaccagaacacttaccagacactg
tcttatggttcatcatatggcattccatacacctatgctgcatatggatcatcggaaacc
aagtctcaaaaaacagataatacagttcctttcaaaactcccagtaatgagatgactcct
gttactattgatttggtaaagaaacagcttaaagacaggttggactctatgaaagaaatg
cacaaagctaatcggcagcaatatgagaaacatcagcaaagccaagaggactctaccaag
gcaattgaaagattagaagggtcttctgggggtattggtgaacggtataagtttttgcaa
gaaatgcgagggtatgtccaagacttgcttgagtgtttcagtgaaaaggtgcctctgatt
aacgaacttgagtctgcaatgcaccagctgtacaaacagcgagcttcccgccttgtccaa
agacgacaagatgatattaaagatgaatcttcggagttttcaagccattcaaataaagca
ctgatggctccaaatcttgattcttttgggcgagacagagtgatctatcaagaacaagtc
aagcgtcggactgcagaaagagaggctagaagagctcgccgcagacaagcaagagagcag
actgggaagatggcagatcacctggaaggcctttccagcgatgacgaggagacttcaacg
gatatcacaaacttcaacttggagcgagatcgtatattgaaagaatccagcaaagttttt
gaagatgttttggaaagtttttactccattgattgcattaagtcacagtttgaagcttgg
cgctccaagtactttgcttcttataaggatgcttatattggcctctgtttaccaaaactg
tttaaccctttaatccgacttcagctgcttacctggactcctttggagggcaagtgtcga
gattttgaaacaatgttgtggtttgagtcattgctgttttatggctgtgaagagcaggag
caggtgaaagatgatgctgatatttcactgttgcctaccattgtagagagagttgttctt
cctaaattaacagtaatttctgaaaatatatgggatcccttttctaccacacagacatct
agaatggtagcaattgtacagaaactaatagatggatatccctcagtggtgaatgcagag
aacaaaaatacacaaatgcttttgaaggccttgttgctaagaatgaggagaacactagat
gatgatgtattcatgcccttgtatccaaaaaacatcttagaaaacaagaactctggtccg
tatttgtttttccaacgtcagttttggtcctctgttaagttattgggaaactttctccag
tggtatggaatcctctcaaacaaaactctacaggagctgtccatagatgggttgctaaat
agatacattcttatggcttttcaaaactcagagtatggagaggacagcattaagaaagct
caaagtgtaattgcttgcttccctaagcagtggttcgctaatctaacaggagacaagact
atttctcagctagaaaacttctgtagataccttgttcacctggctgatacaatttacaga
aacagcattggttgctctgatgtagagaagagaaatgccagggagcacatcaagcagatc
ataaagcttctagcaagtatccgagctctggatcatgccattactgttgcaaatgatcac
aacgtaaaagagttcaagattctaatagaaggaaaatag
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