Geospiza fortis (medium ground-finch): 102033350
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Entry
102033350 CDS
T03755
Symbol
RLIM
Name
(RefSeq) ring finger protein, LIM domain interacting
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102033350 (RLIM)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102033350 (RLIM)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102033350 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
102033350
NCBI-ProteinID:
XP_005428781
UniProt:
A0A8N5I2R7
LinkDB
All DBs
Position
Un
AA seq
595 aa
AA seq
DB search
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDHSSAGEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSPPETRPAPQA
AGSSESTGTGESTAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADSSGSAPSHNVETSEPQSGGGGASGNENADVSSGEVYEGGHEASSTSGARR
EGRNGRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctagtgataaaggaagtattgatcagtcagaagcccaacgtcag
agccagctggatcggttagaccgagaagaagctttctatcagtttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacgacacgaagcgggcagcgaggaaaccag
tcctggagagcagtgagccggactaaccccaatagcggcgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcggaggagctgacagct
gaggaggcttcccctcctagagggcagaggagagccaggagtaggagtccagagcagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagcgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacttgaccactcctcagcgggcgaggct
gagggcagctctagaaccagacagcacgtgacgttaaggcagcacacagtggggactgag
gtgccaagtgaaaatgcagttctgttttccccccctgagacaaggcctgctcctcaagca
gcaggttcttcagaaagcaccggcactggcgagtccacagctcctgggcagaggcctccc
accatagtgctggacctgcaggtgagaagagttcgcccgggcgagtaccggcagagggac
agcatcgccaacaggacccgctcgcgctcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcaccttctcccgctcggagcgggctggggtgagaact
tacgtcagcaccatcaggatccccatccgtaggatcctgaacacgggcctgagcgagacc
acgtcggtcgccatccagaccatgctgaggcagatcatgacgggcttcggggagctcagc
tacttcatgtacagcgatagcgatgcagattccagtgggtcggctcccagtcacaacgtg
gagacttctgagccgcagagcggaggcgggggcgcctcgggcaatgagaatgcagatgtt
agctcaggggaggtgtacgagggggggcacgaggccagctcaacatccggtgccaggcgg
gaaggccgcaatgggaggggatcggtcacttttgaagaaagtggttctttaccattcctt
agccttgcacagtttttcttactcaacgaagatgacgatgaccaacccagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcaccgagtacacggagggcaacaagctccgcaagctgccgtgctcg
cacgagtaccacgtgcactgcatcgaccgctggctgtccgagaactccacctgccccatc
tgccgcagggcagtcctggcctccgggaacagggagagcgtggtctaa
DBGET
integrated database retrieval system
