Geospiza fortis (medium ground-finch): 102033385
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Entry
102033385 CDS
T03755
Symbol
SEH1L
Name
(RefSeq) SEH1 like nucleoporin
KO
K14299
nucleoporin SEH1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03013
Nucleocytoplasmic transport
gfr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102033385 (SEH1L)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102033385 (SEH1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102033385 (SEH1L)
04131 Membrane trafficking [BR:
gfr04131
]
102033385 (SEH1L)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102033385 (SEH1L)
Membrane trafficking [BR:
gfr04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
102033385 (SEH1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
102033385
NCBI-ProteinID:
XP_005423414
UniProt:
A0A6I9HJF9
LinkDB
All DBs
Position
Un
AA seq
579 aa
AA seq
DB search
MDLDKLEKWTHRNLMGFNKTQWSGLTPVSIRPGSKYMESGPAKKHLEVLVRERQDMSQQS
TSTAFRIRYGMRLRRCGHNSNHTQESQNQLGWKRPPRPPRPNTSRPPSAVSSPSSNTFRD
GVSTSPLASPFQYLTTFPEKKSLLMPNLNLPWCSLRLRPHVLLLRESTCRSQARQQANFP
HRPNPLRPIPSRVESSRVWDKSENGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFD
RTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVR
IYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDNSPNILAKVQIY
EYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSS
GGLTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK
GNGSPVNGSSQQGIFNASLGSANTSLQNSLNGSSASRYFFPPLDSPRAGSRWSSHAQLLP
PPPLIEQSCDADTANLQYPHPRRRCVSRPLNLLPENEGV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggatctggacaagctcgagaagtggacccataggaacctcatggggtttaacaagacc
cagtggtcaggtctaaccccagtatcaattagaccggggtctaaatacatggagagcggt
cctgccaagaagcacttggaggtgctggtgcgtgagaggcaggacatgagccagcagtcg
acctccacagcttttcggatccgctatggaatgcgattgcggcgctgtgggcacaacagc
aaccacacacaagaatcccagaaccagctcggttggaaaagacctccgagaccaccaaga
ccgaacaccagcaggccaccaagtgccgtgtccagtccttcctcaaacaccttcagggac
ggtgtctccaccagccctctggccagcccatttcaatacctaaccacctttcctgagaag
aaatccctcctaatgcccaacctaaacctcccctggtgcagcttgagattacgtcctcat
gtcctgttacttcgcgagagtacatgtcgcagtcaggcgcggcagcaggctaacttcccg
catcgccccaaccctctgcggccgattccgagtcgagtcgagtcgagtcgagtctgggac
aaaagtgaaaatggagattggcattgcactgccagctggaagacacatagtggatcagtg
tggcgtgtgacatgggcccatcctgaatttgggcaggtcctggcttcctgctcctttgac
agaacagcagctgtgtgggaagaaatagtgggagagtcaaatgataaactccgaggccag
agtcactgggtcaagaggaccactctagtagacagtagaacatctgttacagatgtgaag
ttcgctcccaagcacatgggtcttatgttagcaacctgttcagcagatggagttgtaagg
atctatgaagctccagatgtgatgaatctcagccagtggtcacttcagcatgaaatctcg
tgtaagctcagctgcagttgtatttcttggaatccttcaagctctcgagcacattctcca
atgatagctgtaggaagtgatgacaacagtccaaacatattggctaaggttcaaatttat
gaatataatgaaaataccaggaaatatgcaaaagcagaagctctgatgacagtcacagat
cctgtacatgatattgcgtttgctccaaatctgggaagatccttccacatcttggctgta
gcaaccaaagacgtacgaattttcacactaaaacctctaaggaaagaattgacttcatca
ggaggattaacaaaatttgaaattcatattgtggcacagtttgataatcacaactcccag
gtgtggcgagtgagctggaatattacaggcacagtgcttgcctcctctggtgatgatggc
tgtgttaggctctggaaggctaattacatggacaactggaagtgtactggtatactgaaa
ggtaatgggagtccagtgaatggtagttctcagcagggaatttttaatgcctctctaggt
tcagccaatacaagtctgcagaattcactaaatggatcatctgccagcaggtatttcttt
ccccctctggattccccacgggctggatcaagatggtccagtcatgcccagctccttcct
cctcctcctctgatagagcagtcttgtgacgctgacactgccaacctccagtatcctcac
cctcgcagacgatgtgtatctcggcctcttaatcttttacctgagaatgaaggggtttaa
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