Geospiza fortis (medium ground-finch): 102033448
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Entry
102033448 CDS
T03755
Symbol
USP9X
Name
(RefSeq) ubiquitin specific peptidase 9, X-linked
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102033448 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102033448 (USP9X)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102033448 (USP9X)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102033448 (USP9X)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102033448 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
102033448
NCBI-ProteinID:
XP_014164058
UniProt:
A0A6I9ZBA7
LinkDB
All DBs
Position
Un
AA seq
2513 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQVLHDR
FMSGSALNVQIIAALIKPFGQCFEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISEIAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCQSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQVKALS
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttcaaat
gagaactctccagctaccccgcctgatgagcagggccaagctgatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccgaagggggaattagaagttcttctagaagct
gctattgacctaagtaaaaaaggccttgatgtcaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatccttcacaaaaatccttacagatgaggcagtgagcggctgg
aagtttgaaattcatagatgtattattaacaacactcatagactagtggaactctgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagctcgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcaggtcttgcatgatcga
ttcatgagcggatcagcattgaatgttcagatcattgcagctctcatcaagccatttgga
caatgttttgaatttttaacattacatacagtgaagaaatacttccttccaattatagaa
atggttccacagtttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgattctt
aggttgttacaaatttcctctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcatactacactcatcgacatggtaatcctgaagaggaagagtgg
ctcacagctgaaagaatggcagaatggatccagcagaacaacattttatcaattgtatta
agagatagtcttcatcaacctcaatatgtagaaaaacttgagaaaattctccggtttgtc
atcaaagagaaagctctcactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatcttcttgcaaaattagcttgggatttc
tctcctgaacagcttgatcacctgtttgattgttttaaggcaagttggacaaatgcaagc
aagaaacagcgtgagaaactgctggagttaattcgtcgccttgcagaggatgacaaggat
ggagtgatggcacacaaagtgctgaaccttttgtggaatttggctcacagtgatgatgtg
ccagttgatatcatggaccaggctcttagtgcccatataaaaatcttagattacagctgt
tcacaggatcgagatacacagaagatccagtggatagatcgttttatagaagagcttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccacagaacttgagtcaaactcagagaagtccccacgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcacgccctcgttacactggttgcagaaaacctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgagtatgatcctcag
actgtgagaccaggaagccgctacagtcacgtgcaggaggtacaggagcgactgaacttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagcagaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagcttgtagcaaagagacgagcc
tatatgatggatgacctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacattgcaaaccgagcaatagaccttcttaaagagatctatactaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttt
gatcgtctaaaagcctcctatgatacattatgtgtgttggatggagataaagacagcatc
aactgtgcaagacaagaagcaataaggatggtgagagtgttgactgttttaagggagtat
ataaatgaatgtgacagtgattaccacgaagagagaactattctacctatgtcaagagct
ttccgtgggaaacatatcacacttgtggttcgttttccaaaccaaggccggcaggtggaa
gatttggatatttggtctcacacaaacgacacgattggccaagtgcggcgctgcatcctc
aatcgcattaaagccaacagtgcacacacaaaagtagagctgttcattgggggtgagctg
gtagatcctgcagatgacagaaaattaattgggcagctgaatctcaaggataaaacgcta
attacagctaagcttacacagataaattctaatatgccctcaagtccagatagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactacagtgatggtccaaatcca
gaagttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagtctaaatatgccacctcttagagatggagct
cgtgttcttatgaagctcatgccaccagacaacactacggtcgagaaactaagagcaatt
tgtttagatcatgcaaagcttggggaaagcagccttagtccatctcttgattctctgttc
tttggtccttctgcctcacaagtgctgtacctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagacgccagtgacttccagtacaacttcctgaaaagt
ggtggtttgcctcttgtgctgagcatgctgaccagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctaccttaatgctctgaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtggaaggc
acgagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctgagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaatacatccctgacatctgtgttatcagg
gcagtacaaaaaattgtttgggcatcaggttgtggatcagttcagctggttttcagctcg
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaatgaaccagacatggaa
gatgaacaagtttgctgtgaagccctggaggtgatgaccctgtgctttgctttgattcca
acagcactggatgctctcagtaaagagaaggcgtggcagacatttattattgatttacta
ttgcactgtcacagcaaaaccgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttactgtt
ctagggagcactgcaagagagagagctaagcattctggagactacttcaccctcttaaga
catcttcttaactatgcttacaacagtaatattaatgtacccaatgctgaagttcttctc
aataatgaaattgactggcttaagagaatcagggatgaagtaaaaagaacaggggaaaca
ggtgtcgaagaaacgatcttagagggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccacattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccagcatccaatgtttatctacaatacatgagaaat
ggagaattgcctgctgagcaggccataccagtgtgtagttcaccagccactattaatgct
ggctttgagctcctcgttgcactagcagttggatgtgtgcgaaatctcaagcagattgta
gacacgttgactgaaatgtattacataggtacagcaatcactacttgtgaagcactcaca
gaatgggaatatctgccacctgttgggcctcggccaccaaagggatttgtgggactgaaa
aatgctggtgccacttgttacatgaattctgtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaatagaaggcacaggcagtgatgtagatgatgacatgtct
ggggatgaaaagcaggacaatgagagcaatgttgacccacgagatgatgtgtttggttat
ccacatcagtatgaagataaaccagcactgagcaaaactgaagatagaaaagagtacaat
attggagttttgaggcatctccaagtaatttttggccatttagcagcttccaggctacag
tactatgtaccaagagggttttggaaacagttcagactctggggtgaacctgtaaatcta
cgtgaacaacacgatgctttagaattttttaattcattggtggacagtttagatgaagct
ttaaaagctttgggtcacccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtacgagtgtgaggaatccttcacaactctg
aatgtagatataaggaatcaccaaaaccttcttgattctttggagcagtacgtcaaagga
gatttattggaaggtgcaaacgcatatcattgtgaaaaatgcaacaaaaaggtggataca
gtgaaacgcttgttgattaagaagttgcctccagttcttgcgatccagttgaaacgattt
gattatgactgggaaagggaatgtgcaatcaaattcaatgattattttgaatttccacga
gaactggacatggagccttacacagtggcaggtgtagcaaaattggaaggggatgatgtg
aatcctgaaaatcagataatacaaaatgagcagtcagaaaatgaacactctgggagcaca
aaatacagacttgtgggtgtacttgtgcacagtggccaggccagcggtggacattactac
tcttacattatccagaggaacggtggagatggtgagaagaaccggtggtacaaatttgat
gatggagatgtgacagagtgtaaaatggatgacgatgaagagatgaaaaatcagtgtttt
gggggagagtacatgggcgaagtgtttgatcacatgatgaagcgaatgtcctacaggcgc
cagaagaggtggtggaatgcttacattcttttttatgaacgcatggacacgatagacaaa
gacaatgaactaataaaatatatttcagaaatcgctatcaccactaaaccccaccagatt
aaaatgccctcggccatcgagcgaagcgtgcgcaagcagaacgtgcagttcatgcacaat
cggatgcagtacagcctggaatatttccagttcataaagaagttgcttacttgcaatagt
gtctacctaaaccctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtatgatgccctgtgcatcctgctccgtcacagc
aagaatgtacgtttttggtttgcacacaacgtcctttttaatgtttcaaaccgcttctct
gagtatctcctggaatgccccagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagacggaccatgtcaatcaccttttgcctctcctgga
ccttccagtcaggcttacgataacttaagtttaagtgatcacttactgagggcggtactg
aatcttctgagaagggaggtatccgagcacgggcgccacttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccgggccctccaattaagtaccag
tatgctgagctggggaagctgtacaccgtggtgtcgcagctgatccgctgctgcaacgtc
tcatcgcggatgcagtcttctatcaatggtaatcccccacttgccaacccttatggtgat
cctaatttatctcaacctataatggcacttcagcagaacgtagcagacattctgtttgtg
agaactagttatgtaaagaaaattattgaagattgcagcaactctgaagagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcagttctcttctacagtcctcagtgaacta
ctttggcaggttgcatattcgtatacatacgagcttcgaccttatttggatctgcttctg
caaatcctattaattgaggactcttggcaaactcacaggattcacaatgcacttaaggga
atcccagatgacagggatggactcttcgacaccattcagcgctcgaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtagctctcttcagcaactgccctgtagct
taccagatccttcagagcaatggagatttgaagagaaaatggacctgggcagtggaatgg
cttggagacgagctggagcgtagaccatacactggcaatccccagtacacctacaataat
tggtctccaccaatacagagcaatgaaacatcaaatggctacttcctagagaggtcacac
agtgctagaatgactcttgcaaaggcttgtgaactctgcccagaggaggaaccagatgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgccccactgtatccccat
tcacctggttcccagtatcaacaggtaaaagctctgagctga
DBGET
integrated database retrieval system
