Geospiza fortis (medium ground-finch): 102033467
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Entry
102033467 CDS
T03755
Symbol
CASC3
Name
(RefSeq) cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03013
Nucleocytoplasmic transport
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102033467 (CASC3)
03015 mRNA surveillance pathway
102033467 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102033467 (CASC3)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102033467 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102033467
NCBI-ProteinID:
XP_014166481
UniProt:
A0A6I9ZAN6
LinkDB
All DBs
Position
Un
AA seq
614 aa
AA seq
DB search
MAGGLGTMRTLGMAGGLGTESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESSKVELKQD
SNDSCESAARGEKGTEKVDAKGAVTGERQSGDGQESTEPVEKKVGKKVPKHLDDDEDRKN
PAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIA
LYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSSERPPKPPRHQGAKSPPAPPRSHN
SRSSGSAGRMPPARNYPRMGGYKETRPGYRASEATVLHRNGEQAKQEGGYRGKHAEQSPS
RDTSPELEVGHVHGSPGKEEGALENQATGADAVQPPPDRPVEKKSYSRARRTRVKAGEAG
KLAEEVPASEGLAPVIPKATPAESSPTPAKSNWESPVESSVDGLEQEMTQMNLTEQNWSP
GQSQFIPPRELRGIPNHVHVGTGPAPQFNRMEEMAVPGGRVKRYSSQRQRPPVPEPAPPM
HISIVEGHYYDPLQFQGPIYAHGENPAPLPPQGMIVQPEMHLPHPGLHPHQTPPAMANPS
LSPPAVSPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPP
EDSKGEKSKERSNT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggcttggggacaatgaggaccctggggatggcggggggcttggggacagaa
agtgaggatggcattgaaggagatgctgtgctctctgactacgaaagcgccgaggactcg
gaggcagaggaagaggattacagcgaggaagaaagctccaaggtggagctgaagcaggac
agcaacgattcctgcgagtcggcagccagaggggagaagggcactgagaaggtggatgcc
aagggagcggtgacgggcgagcggcagagcggggacgggcaggagagcaccgagcctgtg
gagaagaaagttgggaagaaggttcccaagcacctggatgacgatgaggatcgcaagaac
ccggcgtacatcccacgcaaggggctcttctttgagcacgacctccgagggcagacgcag
gaggaggaggtcaggccaaagggtcgtcagcggaagctgtggaaggacgaggggcgctgg
gaacacgacaagttccgtgaggatgagcaggcccccaagaccaggcaggagctgattgct
ctgtatggctacgacatccgctcagcccacaaccccgacgacatcaaaccccgcaggatg
cgcaagccacgctttggcagtccccctcagcgagaccctaactggtccagcgagaggccc
cccaagcccccgaggcaccagggtgccaagagccccccagctcccccacgctcccacaac
agccgcagctctggcagtgctggcaggatgccccctgccaggaactaccccaggatgggg
ggctacaaggagacccgtccaggctaccgagcttcagaggccactgtcctgcacaggaat
ggggaacaagccaagcaggagggtggctaccgtgggaagcacgcagagcagagcccatcg
agggacacgtcccctgagttggaggtgggacatgtccatggcagccctggcaaggaggag
ggggctctggaaaaccaagccacgggtgctgatgctgtgcagccaccaccggacagacca
gtggagaagaaatcttattcccgggcaagaaggaccagagtcaaggctggggaggcaggg
aagctggcagaggaggtgcctgcttctgaggggctggctcctgtgattccaaaagccacg
ccagctgagagctcccccacgccagccaagagcaactgggagtcaccagtggaatccagc
gtggatggacttgagcaggagatgacccagatgaacctgacagagcagaactggagcccg
gggcagtcccagttcatccctccccgggagctgaggggtattcccaaccatgtgcacgtg
ggaactgggccagcaccgcagtttaaccggatggaggagatggcagtgccaggggggcgt
gtgaagcgctactcatcgcagaggcagagaccccccgtgccagagcctgcgccccccatg
cacatcagcatcgtggaagggcactactatgacccactacaattccagggaccaatctac
gcccacggtgagaacccagccccgctgccgccccaagggatgattgtgcagccagagatg
cacctccctcatccaggtttacacccccaccagacgccccctgccatggcaaaccccagc
ctgtcccccccagcagtgtccccccctccgccccctcctcatctctattccaacacgcag
gcgcagtcccaggtgtatgggggggtcacctactacaacactgtccagcagcaggtgcag
cccaagccctccccgccccgccggacgtcccagcctgtgaccatcaagccaccgcctcca
gaggacagcaaaggtgaaaaatcaaaggagaggagcaacacgtag
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