Geospiza fortis (medium ground-finch): 102033543
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Entry
102033543 CDS
T03755
Symbol
KDM1B
Name
(RefSeq) lysine demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102033543 (KDM1B)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102033543 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox_2
Pyr_redox
FAD_binding_3
Pyr_redox_3
HI0933_like
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
ThiF
NAD_binding_7
KARI_N
Shikimate_DH
zf-RING_2
YjeF_N
Motif
Other DBs
NCBI-GeneID:
102033543
NCBI-ProteinID:
XP_005421027
UniProt:
A0A6I9HI85
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All DBs
Position
Un
AA seq
820 aa
AA seq
DB search
MSTGRVRTKKKACSSDQSPDSLPVRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRS
PGESNLVKLEHLKSVPNVTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGLI
NTGILSVNSDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFTGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNFPVQSID
YSGEEVQITTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDQQVLQQCMTVLRELFKEQEVPEPVKFFVTRWSNDPWLQMAYSFVKTGGSGEAYDMI
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgggaagggtacgaacgaaaaaaaaggcatgttcttcagatcagtctccagac
agccttcccgtgaggagttctggaagacaggtgaagaagaaagcagctgaagcagcagat
gatgatgatgaagcatcagagaagaaatatagaaagtgtgaaaaagctggatgcaccgca
acatgtcccgtttgctttgccagtgcagcagaaagatgtgcaaaaaatgggtacacgtct
agatggtaccatctgtcctgtggggaacacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggttatgagaaatacactgcctggaaaaggatttggacaagcaat
ggtaaaagcgagcccagtccaaaagcctttatggctgatcagcagcttccttactgggtg
cagtgcacaaaaccagaatgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaatagcaaaaacctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccaatgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtca
cctggtgaatccaaccttgtgaagttagagcacctaaagagcgtgcctaatgtgactgtt
gcaggcatgaacaagtatttccagcctttttaccagcccaatgaatgtgggaaagcactc
tgtgtgaggccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gaccctaccatgtacctggcattgagaaacttgattttggctttgtggtacacaaactgc
aaggaggctctcacccctcaaaaatgtatccatcatataattgttcgggggcttgtgcgg
atccgctgtgttcaggaaatggagaggatcctgtattttatgacaaggaaagggttaatt
aatacagggattttgtcagtcaattctgaccagtaccttcttcctaaggaataccacaat
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacaactgcac
aactttggaattaaggtcattgttttagaagctaaagacagaattggtggccgagtgtgg
gatgacaagacattcacaggagtcactgttggaagaggtgcacaaatcgtcaatggatgt
gtcaacaacccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaaacc
caacatcaagatgttcctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggtatccagttcagtgagctggaagaaaaagtactgcagttccatctcagtaat
ttggaatatgcctgcggcagcaatctctctcaggtatctgcacgctcatgggaccacaat
gaattttttgcccagtttgctggagatcacactctcctaacagtgggatattcaactgtg
atcgataagttggcagaagggctggacatccggctgaatttcccagttcagagtattgac
tattctggtgaagaagtgcagatcactactgcagatggaacagtgtggacaacacaaaag
gtattggtgactgtacccctggcccttcttcagaaaaatgccattcagtttaatcctcca
ctgtcagaaaaaaaaattaaagccattaatagtttgggagcgggagtcattgagaaaatc
gccttgcagtttccatatagattttgggacagtaaaattcaaggagctgatttttttggt
catgttccacctaattccagccaacgtgggctctttagtgtcttctatgacatggatcca
gagggcaaagaaagcattttaatgtcagtggtcaccggagatgctgtgacaaccattaag
aatttagatgatcaacaagtactgcaacagtgtatgactgtactccgagagctgtttaag
gagcaggaggttcctgagccagtgaagttttttgtgactcgatggagcaatgacccttgg
ctgcagatggcgtacagctttgtgaaaaccgggggcagcggtgaagcttatgacatgata
gctgaagacatacaaggaaaagttttttttgctggtgaggccacaaataggcactttcct
cagaccgttacaggagcttacttgagtggggttcgagaagccagcaaaatagcagcattt
taa
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