KEGG   Geospiza fortis (medium ground-finch): 102033543
Entry
102033543         CDS       T03755                                 
Symbol
KDM1B
Name
(RefSeq) lysine demethylase 1B
  KO
K19413  lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gfr03036]
    102033543 (KDM1B)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102033543 (KDM1B)
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 zf-CW Thi4 SWIRM DAO Pyr_redox_2 Pyr_redox FAD_binding_3 Pyr_redox_3 HI0933_like FAD_binding_2 FAD_oxidored Lycopene_cycl 2-Hacid_dh_C GIDA NAD_binding_9 AlaDh_PNT_C ThiF NAD_binding_7 KARI_N Shikimate_DH zf-RING_2 YjeF_N
Other DBs
NCBI-GeneID: 102033543
NCBI-ProteinID: XP_005421027
UniProt: A0A6I9HI85
LinkDB
Position
Un
AA seq 820 aa
MSTGRVRTKKKACSSDQSPDSLPVRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRS
PGESNLVKLEHLKSVPNVTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGLI
NTGILSVNSDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFTGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNFPVQSID
YSGEEVQITTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDQQVLQQCMTVLRELFKEQEVPEPVKFFVTRWSNDPWLQMAYSFVKTGGSGEAYDMI
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgtcaacgggaagggtacgaacgaaaaaaaaggcatgttcttcagatcagtctccagac
agccttcccgtgaggagttctggaagacaggtgaagaagaaagcagctgaagcagcagat
gatgatgatgaagcatcagagaagaaatatagaaagtgtgaaaaagctggatgcaccgca
acatgtcccgtttgctttgccagtgcagcagaaagatgtgcaaaaaatgggtacacgtct
agatggtaccatctgtcctgtggggaacacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggttatgagaaatacactgcctggaaaaggatttggacaagcaat
ggtaaaagcgagcccagtccaaaagcctttatggctgatcagcagcttccttactgggtg
cagtgcacaaaaccagaatgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaatagcaaaaacctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccaatgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtca
cctggtgaatccaaccttgtgaagttagagcacctaaagagcgtgcctaatgtgactgtt
gcaggcatgaacaagtatttccagcctttttaccagcccaatgaatgtgggaaagcactc
tgtgtgaggccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gaccctaccatgtacctggcattgagaaacttgattttggctttgtggtacacaaactgc
aaggaggctctcacccctcaaaaatgtatccatcatataattgttcgggggcttgtgcgg
atccgctgtgttcaggaaatggagaggatcctgtattttatgacaaggaaagggttaatt
aatacagggattttgtcagtcaattctgaccagtaccttcttcctaaggaataccacaat
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacaactgcac
aactttggaattaaggtcattgttttagaagctaaagacagaattggtggccgagtgtgg
gatgacaagacattcacaggagtcactgttggaagaggtgcacaaatcgtcaatggatgt
gtcaacaacccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaaacc
caacatcaagatgttcctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggtatccagttcagtgagctggaagaaaaagtactgcagttccatctcagtaat
ttggaatatgcctgcggcagcaatctctctcaggtatctgcacgctcatgggaccacaat
gaattttttgcccagtttgctggagatcacactctcctaacagtgggatattcaactgtg
atcgataagttggcagaagggctggacatccggctgaatttcccagttcagagtattgac
tattctggtgaagaagtgcagatcactactgcagatggaacagtgtggacaacacaaaag
gtattggtgactgtacccctggcccttcttcagaaaaatgccattcagtttaatcctcca
ctgtcagaaaaaaaaattaaagccattaatagtttgggagcgggagtcattgagaaaatc
gccttgcagtttccatatagattttgggacagtaaaattcaaggagctgatttttttggt
catgttccacctaattccagccaacgtgggctctttagtgtcttctatgacatggatcca
gagggcaaagaaagcattttaatgtcagtggtcaccggagatgctgtgacaaccattaag
aatttagatgatcaacaagtactgcaacagtgtatgactgtactccgagagctgtttaag
gagcaggaggttcctgagccagtgaagttttttgtgactcgatggagcaatgacccttgg
ctgcagatggcgtacagctttgtgaaaaccgggggcagcggtgaagcttatgacatgata
gctgaagacatacaaggaaaagttttttttgctggtgaggccacaaataggcactttcct
cagaccgttacaggagcttacttgagtggggttcgagaagccagcaaaatagcagcattt
taa

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