Geospiza fortis (medium ground-finch): 102033545
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Entry
102033545 CDS
T03755
Symbol
HNF1A
Name
(RefSeq) HNF1 homeobox A
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102033545 (HNF1A)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102033545 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
NanE
KPBB_C
YebO
Motif
Other DBs
NCBI-GeneID:
102033545
NCBI-ProteinID:
XP_005421549
UniProt:
A0A6I9HH99
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Position
Un
AA seq
631 aa
AA seq
DB search
MVSKLTHLQVELLEALLESGLTKETLIKALSEAEPYGLQSESQRAINALQSEKGEPCPDI
PNGMGDSRASEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAKMVK
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA
GQGILTDEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAE
CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPPPAPPLTPH
SSASLQPPPALSPGKVHGVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPS
QNLLSTDTKLVSAPGGTLPPVSTLTALHSLEQSPHMLSQQTQNLIMASLPGVMAIGAGET
PSLAPAFTNSGASTLVIGLASTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQ
VQSHINQSPFMATMAQIQNPHALYGPKSEVTQYTHAGLLPQTMVITDTANLSALTNLTPT
KQAFTSDSETHTESGMHTPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVLYQS
SDSTNSHSQLLPSTHNVIETFISTQMASSTQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtctccaagctgactcatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccttgatcaaggctctgagtgaagcggagccctacgggctgcagagc
gagagccagcgcgccatcaatgccctgcagagcgagaaaggggagccctgccccgacatc
cccaacggaatgggcgactccagggcgtcagaagatgaaacctcagatgatggagaggaa
tttacccctccgataatgaaggagctggaaaacttgagccctgaggaggctgctcaccag
aaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaagatggtgaag
tcttacctccagcagcacaacatccctcagcgtgaggtggtggacaccacaggtctgaac
caatcccacctctcccaacacctcaacaagggcactcccatgaagacccagaaacgagca
gccctgtacacctggtacgtccggaagcagcgagaggtggcccagcaattcacacatgct
ggccagggcatcctgacagatgagcccatgggagatgacctgcccaccaagaagggaagg
agaaaccgctttaagtggggtcctgcctcacaacagatcctgttccaagcctatgagagg
cagaaaaaccccagcaaagaagagagggaggcactggtggaagagtgcaacagggcagag
tgtattcagagaggagtttccccatctcaggcccagggactgggctcaaacctggtgaca
gaggtcagagtttacaactggtttgccaaccgcaggaaggaggaggctttccggcacaag
ctggccatggacaccttcagcggcccgcagccgcccccggccccgcctctcaccccgcac
agctccgcctccctgcagccgccgccggcgctctcacccggcaaagtccacggagtgagg
tacaaccagcagccagccagtgaggccgagtcctccagcagcaaccaccacgggaacagc
tccatggtgaccacccagaccatcctgcaccaggtgtctccccctgggctggagcccagc
cagaacctgctgagcacagacactaagctggtatcagctcctggaggaactctccctcct
gtcagcaccctgactgccctgcacagcctggagcaaagcccccacatgctgagccagcag
acccagaacctgatcatggcctccctgccgggggtgatggccatcggggcgggcgagacg
ccgtccctggcgcccgccttcaccaacagcggagcctccacgctggtgatcggcctggcc
tcaacccagccccagagtgttcctgtaataaacagcatggggagcagcctcactaccctg
cagcctgttcagttctcccagcaactgcacccatcctaccagcagcccctcatgcagcag
gtccagagccacatcaaccagagccccttcatggctaccatggctcagatacagaaccct
cacgctctttatggccccaaatctgaagtgactcaatacacacatgcaggcctcttacca
caaaccatggtgataacagacacagccaatctcagtgccctgaccaacctgacaccaact
aaacaggcattcacctctgactcagagacccacaccgagtctgggatgcacacaccagtg
tcacaggcaccaacaatccacctacagaaccaagacacaacaatccagcaccttcagcca
ggcccacgcctcacctcgagccctgctgtgtcctccagcagcctggtgctgtaccaaagc
tctgactccaccaacagccacagccagctgctgccatccactcacaacgtcattgagacc
ttcatctccacacagatggcatcttccacccagtaa
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