Geospiza fortis (medium ground-finch): 102033627
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Entry
102033627 CDS
T03755
Symbol
U2AF1
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102033627 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102033627 (U2AF1)
Spliceosome [BR:
gfr03041
]
Complex A
U2 snRNP components
U2 related factors
102033627 (U2AF1)
Complex B
102033627 (U2AF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
102033627
NCBI-ProteinID:
XP_005427282
UniProt:
A0A6I9HPN3
LinkDB
All DBs
Position
Un
AA seq
278 aa
AA seq
DB search
MHYSSRVLIRHEIPVQLFFSVKKSKRNLPEGAEVGGTTGNFVVRYFFLFQVRVQKRQVNC
SFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHY
DEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQ
PIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSR
SRERRSRSRDRGRGGGGGGGGRERDRRRSRDRERSGRF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcattacagttccagagttttaatcaggcatgaaattcctgtgcagctctttttttct
gttaaaaaaagcaaacggaaccttccagaaggtgctgaagttggaggcactactggaaat
tttgtagttaggtatttctttttgtttcaggttagagttcagaaaagacaagtcaactgc
tcattttatttcaaaattggagcttgtcgccatggagacagatgttctcggttgcacaac
aaaccaacatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactct
tcccagtctgctgacggtttgcgctgtgctgtgagcgatgttgaaatgcaggaacattat
gatgagttctttgaggaggtcttcacagaaatggaggagaaatacggcgaagttgaggag
atgaacgtttgtgataaccttggagatcacctagttggaaatgtatacgtaaagttccgc
cgtgaggaagatgccgagaaggccgtgatcgacctgaacaatcgctggttcaacgggcag
cccatccatgccgagctctcccctgtgactgacttcagagaggcctgctgccgtcaatac
gagatgggagagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttct
cgagagttaaggcgcgagttgtatgggcggcgtcgtaaaaagcatcgatccaggtcgagg
tcccgcgagcgccggtctcgatccagagatcgcggccgtggcggcggaggaggaggcggc
ggccgcgagcgtgacaggaggcggtcaagggatcgcgaacgatccggtcgattctga
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integrated database retrieval system
