KEGG   Geospiza fortis (medium ground-finch): 102033627
Entry
102033627         CDS       T03755                                 
Symbol
U2AF1
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102033627 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gfr03041]
    102033627 (U2AF1)
Spliceosome [BR:gfr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102033627 (U2AF1)
 Complex B
    102033627 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 102033627
NCBI-ProteinID: XP_005427282
UniProt: A0A6I9HPN3
LinkDB
Position
Un
AA seq 278 aa
MHYSSRVLIRHEIPVQLFFSVKKSKRNLPEGAEVGGTTGNFVVRYFFLFQVRVQKRQVNC
SFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHY
DEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQ
PIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSR
SRERRSRSRDRGRGGGGGGGGRERDRRRSRDRERSGRF
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcattacagttccagagttttaatcaggcatgaaattcctgtgcagctctttttttct
gttaaaaaaagcaaacggaaccttccagaaggtgctgaagttggaggcactactggaaat
tttgtagttaggtatttctttttgtttcaggttagagttcagaaaagacaagtcaactgc
tcattttatttcaaaattggagcttgtcgccatggagacagatgttctcggttgcacaac
aaaccaacatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactct
tcccagtctgctgacggtttgcgctgtgctgtgagcgatgttgaaatgcaggaacattat
gatgagttctttgaggaggtcttcacagaaatggaggagaaatacggcgaagttgaggag
atgaacgtttgtgataaccttggagatcacctagttggaaatgtatacgtaaagttccgc
cgtgaggaagatgccgagaaggccgtgatcgacctgaacaatcgctggttcaacgggcag
cccatccatgccgagctctcccctgtgactgacttcagagaggcctgctgccgtcaatac
gagatgggagagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttct
cgagagttaaggcgcgagttgtatgggcggcgtcgtaaaaagcatcgatccaggtcgagg
tcccgcgagcgccggtctcgatccagagatcgcggccgtggcggcggaggaggaggcggc
ggccgcgagcgtgacaggaggcggtcaagggatcgcgaacgatccggtcgattctga

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