Geospiza fortis (medium ground-finch): 102033713
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Entry
102033713 CDS
T03755
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102033713
Transcription factors [BR:
gfr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102033713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102033713
NCBI-ProteinID:
XP_005420014
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All DBs
Position
Un
AA seq
313 aa
AA seq
DB search
MTKRRCPGLPTHFRFLFLNVAIFNDVIRSNPCLPGAAEQQGQLEAVRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKT
KTLLKKDKYSLPGNLLAPGGGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQH
PGMNSPQLQQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSLGSMGS
VVKSEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQHYQSA
GTAVNGTVPLTHI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacgacgctgcccgggtttacccacgcacttcagatttttgttcctaaatgtt
gcgatttttaatgatgtcatcagaagtaacccttgcttgcccggagcggcggagcagcag
ggacagctggaggctgtgcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctcggc
gccgactggaagctgctgagcgacgccgagaagcggcccttcatcgacgaggccaagcgg
ctgcgggccgtgcacatgaaggagtatccggattacaaataccggccccggaggaagacc
aagaccttgctgaagaaggacaaatactcgctgcccggtaacctgctggccccggggggg
ggcaacgcggtgagcagccccgtcggggtggggcagaggattgacacttatgcccacatg
aacggctggaccaacggggcttactcgctgatgcaagaccagctgggctacagccagcac
ccgggcatgaacagcccgcagctgcagcagatgcaccgctacgacatgacgggcctgcag
tacagccccatgatgtccacggcccagacctacatgaacgccgcctccacctacagcatg
tcccccgccgcctacggccagcagccctccacggccatgagcctgggctccatgggctcc
gtggtgaaatccgagcccagctcgccgcctccggccatcacttcccactcgcagagggcc
tgcctgggagacctgcgggatatgatcagcatgtacctgccccccggcggggatgccaca
gacccttccgccctgcagggcagcaggttacacagcgtgcaccagcactaccagagtgcc
gggactgccgtgaatggtaccgtaccactaactcacatataa
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