Geospiza fortis (medium ground-finch): 102033773 Help Entry 102033773         CDS       T03755                                  Symbol NUP188 Name (RefSeq) nucleoporin 188   KO K14311   nuclear pore complex protein Nup188 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:gfr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     102033773 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gfr03019]     102033773 (NUP188) Messenger RNA biogenesis [BR:gfr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      102033773 (NUP188) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  102033773 NCBI-ProteinID:  XP_014162619 UniProt:  A0A6I9Z5R6 LinkDB All DBs Position Un AA seq 1618 aa AA seqDB search MLKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALY KAEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPEELLAFAKMFKE QGFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNQH IHQEMDNQLLQLGDVSHHAPVLLAWALLRHTINPDESTNIIRRMGSTAIQLNVFQYLTKL LKSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFW KTEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHK PPDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRL TTVISPPVDVIASCVNCLTVLASRMPAKVWTDLHHTGFLPFVANPLSSMNHMISAEGMNA GGYGNLLMSMEQPQGEYSVTISFLNLVTTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHK WRYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSSAPSLQSLCIFSLANTEAGQAVINI MGIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALT QHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFL THLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVV LELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLP PPSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSSKKRFAYWSEYVRSL AQHVAETEGSSCASVTEYQMLISAWRMLLIISTSHADIMHLTDSAVHQELFLDVLNGTRV LLQVPMSVPCLQLGSMLCTLLLILLKQWKSELSSVDKIINSLTQILEGVLQADQQMMEKT KAKVFSALITVLQMKEMKVNEIPQYPQLVLSVCETLQDEVIALLDQTRHSLTVGDAADDK DSMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEI SLRVKQNLHFTEASLHLLLTLARTQQGAAAMAGAGVTQSVCLPLLSVYQLSTNGAIQTSA SSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQS LACLEEADHTVGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYL QTKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHF TPDVCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGEMDKKK EPFPQATGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSS ELSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR NT seq 4857 nt NT seq  +upstreamnt  +downstreamnt atgctgaagctcgctgactactactatgaggagaggatctgcatcctgcgctgcgtcctc cacctgctcacctacttccaggatgagcgacacccttacacagcacagtacttccagtgc gttgaaaagttggacaaggagctcgttccgaattaccgcaagcagtttgaagcgctctac aaagcagaggctcctacatgggaaacacacggaaatctcatgacagaacgtcaggtttcc cggtggtttgtgcaatgccttcgggaacagtccatgctcctggaagtcatcttcctctac tatgcatactttgaaatggcacctgaggagctcctggcctttgcaaagatgttcaaggag cagggatttggcacaagacaaaccaacagacatttagtagatgagagcatggatcacctt gtggatcgtattggctactttagtgctcttattctggtggaaggcatggaaattgactcc ctccatgagcgtgctttggatgacaggacagaggagcacaagttggccaacaatcagcac atccaccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctcca gtgcttttggcctgggctctgctccgtcacaccataaacccagatgagtccacaaacatc atcaggaggatgggcagcactgctatccagctgaatgtcttccagtatctgacaaaactg ctgaaatccctcagcagtgggggcaagaattgtactgccagcacagcttgtatgtgtatt tatggacttctttcctttgtcctgacatcactggaattgcatacgttgggcaatcagcag gatataattgatgctgcatgtgaagttctggcagcttccagcattcctcagctcttctgg aagacggaacctactgcaggtctgggtattatcctggacagcgtttgtgggatgttcccc catcttctcactcctctccttcagctgctccaagcccttgtgtctgataaatctactgca aaaaaggtgtacagtttcctggataaaatgtccttctatattgagctgtacaagcacaaa cctccagatgtgatctcccatgaggacggcacactgtggcgaagacaggctccaaagctc ctctatcctcttggactaggtcagacaaatctacggatacctcagggaacagtgggccaa gtgatgctcgatgatcgggcttatttggtacggtgggagtattcctacagcagctggact ctgttcacctgtgaaattgagatgctgctgcatgttgtgtcaacagcagatgtgattcag cattgccagagggtcaagcccataattgatctggttcataaagtcatcagcactgatgta tcaatagcagattgtcttctgccaatcacatcacgaatctacatgctcctgcagaggcta acaactgtaatctctccccctgtggatgttattgcttcttgtgtcaattgcttgacagtc ctggcttctcggatgccagccaaggtttggactgaccttcaccacacggggttcttgcca tttgttgccaatccactgtccagtatgaatcacatgatcagtgcagagggaatgaatgct gggggctatggaaaccttttgatgagcatggagcagccccaaggcgagtacagtgttacc atctccttcctgaacctggtaacaactcttgtccggggacaacttggtagcacccagagc caaggcctggtgccctgcatcgtgtttgttctgaaggaaatgttaccaaattaccacaaa tggagatacaactctcacggagtgagagagaaaatcgggtgcctaattctgcagctgatc catgctatactgaacttatgccctgaaatggatcctcgcagcagcagtgcccccagcctg cagtccttgtgcatcttcagcctggccaacacagaggcagggcaagctgtcattaacatc atgggcattggggtggacaccattgacatggtcatggcctcccagtccagcagtgatgag tcccagggccaagggcagctgctgatccagacagtgaagttggcattctctgttaccaac aacgtcatccggctgaagcccccgtccagcgtggtgtcacccctggagcaggcactcact cagcatggtgctcatgggaacaaccttattgctgtcttggccaaatacatctaccacaag catgaccctgcacttccacgcctggccatccagctgctcaaacgactggctacagttgct cccatgtctgtgtacgcctgcctgggcagtgatgctgctgccatccgcgacgccttcctc acccacctgcagagcaagatcgaggacatgcgcatcaaggtcatgatcctggagttcctc acagtggcagtggagacacagcctgggctcattgagctgttcctcaacttggaagtgaag gatggcagtgatgggtcaaaggaattcagcttgggggagtggagttgcctccaagtggtg ttagagctgattgactccaagcagcaggagaggtactggtgccctcccctcctgcaccgc gctgccatcgccttcctgcacgcgctgtggcaggaccgtcgtgacagtgccatgcttgtg ctgaggacaaagccaaagttttgggaaaatttaactaatcccctctttgggacccttcct ccgccttccgaatcatcagagctcagtgtcttggatacctgtgccttaataatgaaaatc atctgcttggagatctactatgttgtcaagggttcactggaccagtccctgaaagacact ctgaagaatttctccagcaagaagcgctttgcctactggtcagagtacgtgaggtccttg gcccagcacgtggcagagaccgagggcagcagctgtgcctctgtcaccgagtaccaaatg ctcatctcagcctggaggatgctgctcatcatctccacaagccatgctgatatcatgcat ctgactgattctgcagttcatcaggagttgtttctggacgtgctaaatggcaccagggtt ttgctccaggttcccatgtcagtgccctgtctgcagctggggtctatgctgtgtaccctt cttctgatcctgctcaagcagtggaaaagcgagttgagttctgtggataaaatcataaac tccttgacgcagattctggagggagtactacaggcagatcagcagatgatggagaaaacc aaagccaaagtgttctcagctcttatcactgttctgcaaatgaaggagatgaaagtgaat gagatcccccagtacccccagctggtgctgagtgtgtgtgagactctccaggatgaggtc attgctcttttggaccagacccggcacagcctgaccgtgggtgacgctgcagatgacaag gacagcatggagaccgacgacgcctcccgggtgaagcacaaggaccagcgagacggggtg tgtgttctgggtctgcacctggctaaggagctctgtgaagtagatgaagatggagattac tggctgcagattactaggaaagtccctgtgcttcctaccatctttgctgcactggagatc agcctgagagttaaacaaaaccttcacttcacagaggcctcgttacatttgctgctgacc ttagcaaggactcagcagggagcagcagcaatggctggagctggtgtcactcagagcgtc tgcctgcccctcctgagcgtgtaccagctcagcacaaatggagccatccagacatctgct tcatcccggaaatccctggatgccccctcctggcccggggtctatcgcctctccatgtcc ctcatggaacgtcttctcaaaacactgagatacaacttcctgacagaagctctggatttt gtgggtgtccatcaggagaggatccttcagtgcctgaatgcagtacggaccgtgcagagc ttggcctgtctggaagaggctgatcacactgttggcttcattcttcagctctcaaatttc acaaaggagtggcatttccacctgccacagcttatgagggacatgcaggtgaatctgtgt tacctgtgccaggcctgtacctccctcctgcacagccgtaaaatgctccagcactaccta cagacaaaaaacggtgactccctcccatccagcgtgactccccgagtgcagcgcaacccc caggcctcctccaagcaccccagccccgagtcagaggcagcagagcagaaggccctgctc acagtgcagtacagcctcctcaaaatcctcagcaagtctctggctgccctgcgccacttc acccctgatgtctgccagatcctccttgaccagtctctggaccttgctgagtacaacgtg ctctttgtcctgagtttcaccacaccagcctttgactcggacgttgcaccttcctttggg accctccttgccacagtcaacgtggccctgaacatgctgggagagatggataagaagaaa gaacctttccctcaggctacagggctgaatatgcaagagggaaccaaaaccctcaagtct ctgctgatgtttaccatggagaactgtttctacctgctcatctcgcaggctgtgcggtac ctgcgggacccggccgtgcacccccgggacaagcagcgcatgaagcaggagctcagctcg gagctgagtacgctgctctccagcctgtcccggtacttccgcaggggaggtccctcttca cctgccagcggggtccttccctctccccagggaaagtctgcctccaagctgggtccagag gggcaggagcccttgtttcagctggtgcaggcctttgtccggcacgtgcagagatag

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