Geospiza fortis (medium ground-finch): 102033809
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Entry
102033809 CDS
T03755
Symbol
TMC6
Name
(RefSeq) transmembrane channel like 6
KO
K21988
transmembrane channel-like protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102033809 (TMC6)
03037 Cilium and associated proteins [BR:
gfr03037
]
102033809 (TMC6)
Transporters [BR:
gfr02000
]
Other transporters
Pores ion channels [TC:
1
]
102033809 (TMC6)
Cilium and associated proteins [BR:
gfr03037
]
Other cilia and associated proteins
Stereociliary proteins
102033809 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Cornifin
Motif
Other DBs
NCBI-GeneID:
102033809
NCBI-ProteinID:
XP_014166197
LinkDB
All DBs
Position
Un
AA seq
822 aa
AA seq
DB search
QPPSITLHVPEGSESDGQEPSPDNERALHTSFHQLILEQSSLIEAGLELEMQERARESPA
YLAVPEACATAWPEPRQGEEHPRHSSASLQILASMPSRTIAYLVVPEACATAWPEPRQGE
EHPRHSSASLQILASMPSRTIGRSLGAVISQYCNRTARLRRQSSRPPLQQLCRAARPRAL
SLLWARDRQAKRRLLVKELLSLSPSQCSHMLLTMPLSLAEKRILRRQLSGQRGPVRQRAH
GWAPVSPCAWSRVCVGLGCRGLWYRLLSLLRAAQPGHYALKQIGGRFGSSVLSYFLFLKT
LLMLNFFSFFILLAFVVVLQAVYPSASVSSQPFSGLELLTGAGHFTHSLLYYGYYSNATL
NDPCTSTPEGSVCPLPAPLLPYNLPLAYLFSVGASFLVTCILLVYSVSRSFRESVKSSTG
DLAIKVFCAWDFKVIQRRSVKLQCENICTQLKELLAERRSRSRSQSRLGQGLVLLLAWLL
ALGWVSGCVLAVHYLLEHMHVGSGRWQQEAIQMVLPLVVSLLNALVPHLFNLLAMWEKQD
SPVTQVSVAIFRNLILKVVILSLLCYHWLSRSVICSTEECWETCVGQELYRFMVMDFIFT
LLDTLFGELIWRLILEKRLKTKQRPEFDIARNVLELIYGQTLTWLGVLFAPLLPAVQMLK
LLLLFYIKKTSLLRNCQSPSKPWQASRMSTVFITLLCFPSFLGAAAFLSYTIWSVQPSET
CGPFRGLETIYKSGKRWVLVLEKSNPNITWFAWVYQHLLENTCLLFFTSVALIAVIYFNI
QVVRGHQRVICLLQEQIANEGEDKLFLMQKLRSVYEQRGRRC
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
cagccgccctccatcaccctgcacgtccccgagggctccgagagcgatggccaggagccc
agtccggacaacgagagagccctgcacacctcattccaccagctcatcctggagcagagc
agcttgatcgaggcaggtctggagctggagatgcaggagagggccagagagtccccagcc
tacttggctgttccagaagcctgtgccacggcctggccagagcccaggcaaggtgaggag
caccccaggcactcctctgcctccctgcagatcctggccagcatgcccagccgcaccatc
gcctacttggttgttccagaagcctgtgccacggcctggccagagcccaggcaaggtgag
gagcaccccaggcactcctctgcctccctgcagatcctggccagcatgcccagccgcacc
atcggacgcagcctcggggccgtcatctcgcagtactgcaaccgcacggcgcggctgcgg
cgccagagcagccgcccgcccctgcagcagctctgccgcgcagcacggccccgcgcactg
tccctgctctgggctagggacaggcaggctaagcggcgcctgctggtgaaggagctgctg
agcctctcgcccagccagtgcagccacatgctgctcaccatgcccctcagcctggcggag
aaacgcatcctccggcggcagctgagcgggcagaggggcccagtgaggcagcgcgcccat
ggctgggcccccgtttcaccctgtgcttggtccagggtctgcgtcggccttggctgccga
ggtctctggtacaggctcctctccctgctccgtgctgcacagcccgggcactatgccctg
aagcagattggtggccgctttggctccagtgtcctgtcctacttcctcttcctcaagaca
ctccttatgttgaacttcttttcattcttcatcctcctggccttcgtggtggtcctgcag
gccgtgtaccccagtgcatcagtcagttcccagcccttcagtggcctggagctgctcaca
ggagcgggccacttcactcactcgctgctgtactacggctactacagcaacgccaccctg
aacgacccctgcacctccactcctgagggcagcgtgtgccccctcccagcccccctgctc
ccctacaacctgcctctggcctacctgttcagtgttggggcctccttccttgtcacctgc
atcctgctggtgtacagtgtgtcccgctcttttcgggagagcgtgaagagctccacaggg
gacttggccatcaaggtcttctgtgcctgggacttcaaggtgatccagaggcgctcggtg
aagctgcagtgcgagaacatctgcacacagctgaaggagctgctggcggagcggcgctcc
cgctcccgctcccagagccgcttggggcagggcctggtgctgctgctggcctggctgctg
gccctgggctgggtgtcgggctgcgtgctggctgtgcactacctcttggagcacatgcac
gtgggcagtggcagatggcagcaagaagccattcagatggtcctgccccttgtggtgtcc
ctcctcaatgccttggtgccccacctgttcaacttgctggcgatgtgggagaagcaggac
tccccagtgacacaggtctccgtggccatcttcaggaacctcatcctgaaggtggtgatt
ctcagcctgctgtgctaccactggctcagccggagcgttatctgctcgacagaggagtgc
tgggagacgtgtgtggggcaggagctgtaccgcttcatggtgatggatttcatattcacc
ctgctggacacgctcttcggggagctgatctggaggctaattctggagaagaggctgaag
acaaagcagaggccagagtttgacatcgcccgaaatgtgctggagctgatctatgggcag
accctgacctggctgggcgttctctttgctccactcctgccagctgtgcagatgctgaag
ctgctgctgttgttctatatcaaaaagaccagcctgctgcggaactgccagtcccccagc
aagccctggcaagcctcacgcatgagcaccgtgttcatcactctgctgtgcttcccctcc
ttcctgggtgcagctgccttcctctcctacaccatctggtcggtgcagccatcagaaacc
tgcggtcccttccgggggctggaaaccatctacaagtcagggaagaggtgggtgctagtg
ctggagaagtccaaccccaacatcacctggtttgcctgggtctaccagcacctgttggag
aacacatgcctcctgttcttcacgtctgtggccctgatagctgtgatctacttcaacatc
caggtggtgagaggccaccagagggtcatctgcctgctccaggagcagattgccaacgaa
ggggaggataagctgtttctcatgcagaagctccgctccgtgtacgagcagagaggcagg
cgttgctga
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