Geospiza fortis (medium ground-finch): 102033830
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Entry
102033830 CDS
T03755
Symbol
TAF1B
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102033830 (TAF1B)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102033830 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF7329
Motif
Other DBs
NCBI-GeneID:
102033830
NCBI-ProteinID:
XP_005420352
LinkDB
All DBs
Position
Un
AA seq
592 aa
AA seq
DB search
MCKEKADDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNTDFITNSRVQTISK
GLKRQEKTDGGCEWYICEGFQLVLKKQVEALEALGVCPQMKDEILYNFWRRYLQKSKQAY
CKRPAGETVKALSVCESSTDVDSDPERPSLLHLLSLSESEGDLQTDCSFASSVSKVSEST
SVYSGSVDGSLYLMKNQKEKLRMTMPMTLSFCYLALLWVREPITLSELLRFVVEGHIPYM
NVFQHFPEKMKLCGLDLKIFCVESWPVYEEVFNKMHELAAFLDLPRFPDITESCFLHPDM
LCMKYLMEANLPDELHNWTCRVVKKIGIGEVDFLTLMPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSEFAEERNKNNTEGGPYFEFKKWYEVVKHSLDVEQKKLDEEKAKYL
WRCEKPLFYSVKNKSKVLKRRQMVVNLQNQFGKLSGSVQRAEKPNPSSFQLSWSEENTDG
SCFHGHSLKGVLQEKRGLLTAMNPDYWLCTVKLCNEKLCGHLAHYREVEFPQSYHFVLGL
FSFLLRIQPSYIHDEVCMIEHRLFNKKLCKKLKYNTVLRKSKRPKTSSIKPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaagaaaaggctgatgattttaatgagcgctgtgctcagtgttcagaagtgaac
tggggtctcactgatggaggcagattttattgtagatcttgccacaacgttactgagaga
actagagaagttgtaaacactgattttattactaattcaagagtccaaacaatctccaaa
ggtttaaaaaggcaggaaaaaaccgatggaggttgtgaatggtatatttgtgaaggcttt
cagcttgtactcaagaaacaagtggaagctctagaagcattaggagtatgtccacaaatg
aaggatgaaattctgtacaatttttggaggcgttaccttcagaagagcaaacaggcatat
tgcaagagaccagctggagaaactgtcaaagcattatcagtatgtgagagcagtactgat
gtggacagtgatccagagagacccagcctcctgcacttgctgtctctctctgaaagtgag
ggggatctgcagaccgactgcagctttgcctcatcagtgagcaaggtctcagaaagcacc
tctgtgtactctggatcagtagatggcagcttgtatttaatgaagaaccaaaaggagaaa
ctgaggatgacaatgccaatgacactttcgttttgttacttggctttactctgggtgaga
gagccaattacattgtccgagctcttaaggtttgttgttgaagggcatattccatacatg
aatgttttccagcattttccagagaaaatgaagttatgtggacttgatcttaagatcttt
tgtgtagagtcgtggcctgtatatgaagaagtattcaacaaaatgcatgaacttgcagcg
tttttagacctgcctcgttttccagatataacagaaagctgctttcttcatccagacatg
ctgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataattggacttgt
cgagtggtgaaaaagattggtattggagaagtggatttcctgactctaatgcctggaaat
aagtcaacaagaaaagtgaaatatgatgttcttgctgcagcagttattgtagttgtgctc
aaattattgtttttattagatgatcactatgaatggttactttcagagtttgctgaagaa
agaaataaaaataacacagaaggaggcccatattttgagttcaagaagtggtatgaggtg
gtaaaacattccttggatgtggagcaaaagaaactggatgaagaaaaagccaagtatctt
tggagatgtgaaaagccattgttttattcagtcaagaataaatctaaagttctaaagaga
agacaaatggttgtgaacttacaaaatcagtttggcaagctgtctggttcagtgcaacgt
gctgaaaagccaaatccatcaagttttcagttaagttggtctgaagaaaacacagatggg
agttgttttcacgggcatagcctgaagggagttttgcaagaaaaaaggggtttactgaca
gccatgaaccctgactattggctgtgtacagttaaactatgtaatgagaaattgtgtggt
catctggctcattacagagaagtggagtttccccagagttaccattttgtgttagggttg
ttctcttttcttctgaggattcaaccctcttatatccatgacgaggtgtgtatgatagaa
cacagactttttaataaaaaactctgtaaaaaactaaaatacaacacagtgctaaggaag
tcaaaaaggcctaaaacctccagtattaaacccatgtaa
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