Geospiza fortis (medium ground-finch): 102033853 Help Entry 102033853         CDS       T03755                                  Symbol ARID1A Name (RefSeq) AT-rich interaction domain 1A   KO K11653   AT-rich interactive domain-containing protein 1 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:gfr00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     102033853 (ARID1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:gfr03000]     102033853 (ARID1A)    03021 Transcription machinery [BR:gfr03021]     102033853 (ARID1A)    03036 Chromosome and associated proteins [BR:gfr03036]     102033853 (ARID1A) Transcription factors [BR:gfr03000]  Eukaryotic type   Helix-turn-helix    ARID     102033853 (ARID1A) Transcription machinery [BR:gfr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      102033853 (ARID1A) Chromosome and associated proteins [BR:gfr03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     102033853 (ARID1A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  BAF250_C ARID Motif Other DBs NCBI-GeneID:  102033853 NCBI-ProteinID:  XP_005427199 LinkDB All DBs Position Un AA seq 1545 aa AA seqDB search MSFSLPASPMDQMGKMRPQPYGGNNPYSQQAGPQAGPQQGHGYPGQPYGPQGPQRYPMAM QSRTQSAMGSISYAQQMPPYGQQGPSAYGQQSQSPYYNQQSPHPQQQQHSAYGQQRFPPP QELSQDSFGSQASSAPSMASSKGQEEMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGV STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPG NQMPPRPPSGQSDTILHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGAQM HAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQM HGQSGVPPYSGLPPGRMGHGAMGSRPYGPNMANMPPQVGSGMCPPPAGMNRKAQEAAAAA MHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMMNPQGPPYPMGGNMANNSAG MAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPER KLWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNL NVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGS MQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQK RNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKDPQKHDSYGNQFSAQGTSSGSPF PSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGNRPPPYGASAPVPPMTRPPQSNYQTPPS MQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRR DITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYD DNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASS PEEGEEDDEPRSLNCEEEEEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKND PFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKR SAAESNPSPREGEAPAPDGSSEKRITATMDDMLSARPGSLAGEEEEVKASETAKESSKFP FVISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFE MSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENT LVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLE TLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSL AARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQSPPFEATSVDMMRRAARALLA LAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS NT seq 4638 nt NT seq  +upstreamnt  +downstreamnt atgagcttctccctgccggcgagcccgatggatcagatggggaagatgaggcctcagccc tacggagggaacaacccctactcgcagcaggcggggccgcaggcggggccgcagcagggc cacggctaccccgggcagccctacgggccccagggcccccagagataccccatggccatg cagagcaggacgcagagtgccatgggcagcatctcctatgcacagcagatgcctccgtac gggcagcagggccccagcgcgtacgggcagcagagccagagcccctactacaaccagcag agccctcacccgcagcagcagcagcactcggcctacggccagcagcgcttccccccgcct caggagttatctcaagactcgtttgggtcccaggcatcctctgctccctcaatggcttcc agtaaagggcaagaagagatgaacttgaatcttcagtccagaccttccagcctgccggac ctgtctggttccatagatgacctgcccatggggaccgaaggagccctgagccctggagta agcacatcagggatttccagcagccaaggagagcagagtaacccagctcagtctcctttc tcgccacatacctctcctcacctgccaggcatcagaggaccctccccctccccagttgga tctccagccagcgttgctcagtcccgctccggtcccctgtcccctgctgcagtcccaggc aatcagatgcctccccgcccgcccagcggccagtcggacacgatcctgcacccctccatg aaccagtcgagcatcgcgcaggaccgagggtacatgcagaggaacccccagatgccccag tacagctccccccagcccggctcagccttatccccccggcagtcctcgggagcacagatg cacgccggcatggggccctaccagcagaactccatggggagctacggaccccagggcggc cagtacggacctcaaggagggtaccccaggcagccaaactacaacgccatgtccaacgcc aactaccccagcccgggcatggggggcagcatgaaccccatgggggcgggcagccagatg cacggccagagcggggtgcccccgtacagcgggctgcccccgggcaggatgggccacggg gccatgggcagccggccctacgggcccaacatggccaacatgccgccccaggtgggcagc gggatgtgccccccgcccgccggcatgaaccgcaaggcgcaggaggcggccgccgccgcc atgcacgccgctgccaactccatccagaacaggcctcctggttatcccaacatgaaccag gggggaatgatgggcactgggcctccttatgggcagggaattaacagcatggctggcatg atgaacccccaggggcccccctaccccatggggggcaacatggccaacaactctgcaggg atggcagcaagccctgaaatgatgggactcggggatgtcaaattaacacctgcaactaaa atgaacaacaaggcagatgggacgcccaaagcagaatccaagtcaaagaagtccagttcc tctaccacgaccaacgagaagatcaccaagctgtacgagctgggaggggagcccgagagg aagctgtgggtggatcgatacctggccttcactgaggagaaggccatgggcatgaccaac ctgccagccgtgggcaggaagcccctggacctgtacaggctctacatctctgtcaaggag atcgggggattgactcaggtcaacaagaacaagaagtggcgtgagctggccaccaacctg aacgtgggcacgtcgagcagtgcagccagctctctgaagaagcagtacatccagtgtctg tacgccttcgagtgcaagatcgagcgcggcgaggacccccctcccgacatcttcgcagct gctgactccaagaagtcccagaccaagatccagcccccgtctccagcgggttcaggctcc atgcagggccctcagacacctcagtccaccagcagctccatggcagaaggaggagacttg aagccaccgactccagcctcgacgcctcacagtcagatgccccctttgccaggcatcagg agtaactccgtgggccttcaggatgcctttgcagacggcagtgatcccacgttccagaaa cggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatgatg ggtcgcatgtcttacgagccaaataaagatccctacagcagtatgaggaaagatcctcag aaacatgattcctatggcaatcaattctccgctcaaggcacatcctcgggcagccccttc cccagccagcaaaccaccatgtatcagcagcagcagcagaactacaagcggccgatggac ggcagctacgggctccccgccaagcggcacgaggggaacaggccacctccctatggcgcc tccgcccccgtgccccccatgaccaggcccccccagtccaactaccagaccccccccagc atgcagaatcacattcctcaggtatccagcccagcacctctgcccagacctctggagaac cgcacttctcccagtaaatctccgttcctgcactcggggatgaagatgcagaaggcgggg ccgcccgtgcctgcctcgcacatcacaccagcagctgtgcagccccccatgatccgacgg gacatcaccttcccacccggctccgtggaggccacgcaacccgtgctgaagcagaggagg cggctgacggcaaaagatatcggaactcctgaagcctggagagtgatgatgtctctgaag tcggggctgctggctgaaagtacgtgggccttagataccataaacatcctgctctatgat gacaacagcataatgaccttcaacctcagccagctgccaggcttgctggaactcttggtg gaatatttccggcgctgcctgatcgagatctttggaatcctgaaggaatacgaggtagga gacccagggcaaagaacactattagatccagaaaggttctgcaaatcttcagcttcctcc cctgaagaaggggaggaggacgatgagccacggagcctgaactgtgaggaggaagaggag gatgaggaagaggaggaggccgcgttttcgagcaaggacaaagtacctctagagagcagc gaggagaagctagtgagtaaatttgacaagcttccagtgaaggtggtgcagaagaacgac ccctttgtggtggattactcggacaagctgggccgggtgcaggagttcgacagcgggctc ctgcactggcgcatcggcggcggggacaccacggagcacatccagacacacttcgagagc aagaccgagctgcccttgcctcacaaacgagcttcctgctcctctgccctgaggaaacgt tcagcagccgagagcaacccgagccccagggaaggggaggctcccgcacccgacggctcc tcggagaagaggataactgccaccatggacgacatgctctcagcacgcccgggctccctg gcaggcgaggaggaggaggtcaaagcttcagaaacggccaaggagagcagcaagtttccc tttgtcatcagtccagctcagagccacagaaatataaaaatcctggaggatgaaccccac agtaaggacgagacgccgctctgcaccctcctggactggcaggactctctggccaagcgc tgcatctgcgtctccaacatcatcaggagtttatcgtttgtgccaggcaatgactttgaa atgtccaaacaccctgggctgctgctgattctagggaaactgatcctcctacaccacaag catccagaacgcaaacaggcccccctgacctatgagaaggaggaggagcaggaccaaggg gtgagctgcaacaaggtggagtggtggtgggactgtttggagatgctgcgtgaaaacaca ctggtcacgttggccaacatttctgggcagctggacctctccccttacccggaaagcatc tgtttgcctatcctggatggactcctccactgggcagtgtgtccctcagcagaggcccag gatccctttccgacactgggacccaacgctgtcctctcccctcagagactggttttggaa acactcagcaaactcagcatccaggataacaacgtggatctgatcctggccacgccgccg ttcagccgcctggagaagctgtacagcaccatggtgcggttcctcagtgacagaaagaac ccggtgtgccgggagatggctgtggtgctgctggccaacctggcccagggggacagcctg gccgccagagccatcgcggtgcagaagggcagcattggcaacctgctgggcttcctggag gacagcctggccgccacgcagttccagcagagccaggcggggctgatgcacatgcagagc ccgcccttcgaggccaccagcgtggacatgatgcgccgcgccgcccgcgcgctgctggcc ctggccaaggtggacgagaaccactcagagttcaccttgtacgagtcgcggctcttggac atctccgtgtcgcctttgatgaactctttggtttcacaagttatttgtgatgtactgttt ttaattggccagtcatga

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