Geospiza fortis (medium ground-finch): 102033893
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Entry
102033893 CDS
T03755
Symbol
SS18L1
Name
(RefSeq) SS18L1, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102033893 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102033893 (SS18L1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102033893 (SS18L1)
GBAF(ncBAF) complex
102033893 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102033893
NCBI-ProteinID:
XP_005423676
UniProt:
A0A6I9HLQ6
LinkDB
All DBs
Position
Un
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSLSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaacctggtttac
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaacataaacttgggcccgggagggatgagtcagagcgcctccaaccaatccctccac
tcgcagagcaatctcagcgatgccatcgggaccggcctccctccctcctccctcatgcag
agtcagattagcaatggtcctaaccacgtgtctatgcagcagtcgggccagaacaccatg
cccacgacctctctgagcatgactgtcagcagccatggcactggccctggctacagccac
acagtgcctgcgtctcagaacgtgccaatgcaaggccagggctccatcggcaattacgtc
tctcgaacaaacatcaacatgcagtccaacccagtctccatgatgcaccagcaagcagca
acatcacattacaactcagcacaaggagggagccagcactaccagggacaatcctccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcttcacagcaaggttcctcgcagcagtacatgggtcaggaagaatattacagt
gagcagtacagtcatggccaaggctcatcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcagtcatcctatactgaacagagctacgaccggtcc
tttgacgactctacacaacactactatgaaggaggaaattctcagtacagccagcagcag
gcaggataccaacagggagctgcacaacagcaaacatattcccagcagcaatacccaaat
caacagagttacccaggacaacagcaaggatatggtcctgcacaaggagcctcttcacag
tattccagctaccaacagggacaggggcagcaatatggaagttacagagcttcccaaaca
ggcccatccgctcagcaacagaggccttatggctatgagcagggacaatatggaaattac
cagcaataa
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