Geospiza fortis (medium ground-finch): 102034000
Help
Entry
102034000 CDS
T03755
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102034000 (RIMS1)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102034000 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
102034000 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
FYVE_2
Motif
Other DBs
NCBI-GeneID:
102034000
NCBI-ProteinID:
XP_014162541
UniProt:
A0A6I9Z5P4
LinkDB
All DBs
Position
Un
AA seq
1413 aa
AA seq
DB search
MWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGASSDAPREKKARLQERSR
SQTPLSTAAASSQEISSSSVQPDRRKGAEVSQPAMGPDQKQASRSRSEPPKERKKAVLIS
DQNGKGVKSERKRVPKSSLQKEGPTDDRERKERHEGRRLEKGKSQDYPDLPEKLEEGKVP
DDEKQRKEDEYHTCYKSDPNLARYPVKPHPEEQQMRMHAKVSKARHERRHSDVALPHTEM
EEAEVPENKLGKRSQLQGTQDRKSLVETQRSYSIDRTGDVRISVSKQLTNHSPPTPRHSP
VPIEHVEYKNHDSFIKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQSESVRPSPPKP
HRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYYWLDPATWHSRE
TSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTELGRLGAFIT
KVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDI
PRIPETSHPPLESSSSSFESQKMERPSISVISPTSPGALRDAPQVLPGQLSVKLWYDKVG
HQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSLEPKWNQTFLYS
HVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLP
LPQPSPFMPRRHVHGGESTSKKLQRSRPISDSDISDFDVDDGIGVVPPVGYRSSTRESKS
TTLTVPEQQRTTTHHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHQMRRSRSPTRHH
DASRTPVDYRSREMDSQYLSDQESELLMLPRAKRGRSAECLHTISELQPSLDRARSASTN
CLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQHASPEDDRQSRKVERYSSQKQARKG
PAAETERTHQQGSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKV
HRYNQTSGSGSSQEHEREQYTKYNIQTDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRL
SSTSFMSEQSERPRGRISTFTPKMQGRRMGTSGRITKSTSVSGEMYKLEHIDGSQSDTAV
GMVGTGGKKRRSSFSAKVVAIVSRRSRSTSQLSQTEAGSKKLKSTIQRSTETGMAAEMRS
RMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAM
GDIQIGMVDKKGQLEVEVIRARGLIQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKT
LDPLYQQTLVFEESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSVVIGWYKLF
PPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatgcaatttatgtcgaaagcaacaagaaatcctaacaaaatccggagcgtgg
ttttttgggagcgggccgcagccgtcgcccagccaggacgggacgctgagtgatacggcc
acgggcgcaagctcggacgcaccgagagaaaagaaagcgaggcttcaagagcgatcgagg
tcacagactcccctgagtacagcagctgcctcatcacaggaaatctcctcttccagtgtg
cagcctgaccgtaggaaaggagcagaagtgtcacagccagctatgggcccggaccaaaag
caagcttcaaggtctaggagtgaacctccaaaagagaggaagaaggcagtactgatttct
gaccagaatggcaaaggtgtaaagagtgagcgtaagcgtgtgccaaaatcctcacttcaa
aaagaaggaccaacagatgacagggagcgtaaagagcggcatgaaggtagaaggctggag
aaaggcaagtcacaggattacccagacttgccagagaaacttgaggaaggcaaagtgcct
gacgatgaaaaacaaaggaaggaagatgaatatcatacctgttacaagagtgaccccaat
ctggcaagataccctgtaaaaccacaccctgaggagcagcagatgcgcatgcatgccaaa
gtttctaaagcacgacacgagagaagacacagtgatgtagctttgccacacacagaaatg
gaggaagcggaggtacctgagaataaattaggaaaacgctcacaattacagggaactcag
gacagaaaatctcttgtggaaactcagaggtcgtactctatagacagaacaggtgatgta
agaatttctgtttctaaacaattaactaatcatagcccaccaactcccaggcatagtcca
gttcctatagaacacgtagaatacaagaaccacgattcctttataaaacagagccgcctt
gatcctagctctgctattctcatgcgaaaagcaaagcgggagaaaatggagaccatgcta
aggaatgattcccttagctctgaccagtcggaatcagtgcggccatcccctccaaagcct
catagagcaaaaagaggcggaaagaaaaggcagatgtcagttagtagctcagaggaagaa
ggggcatcaacaccagaatatactagctgtgaagatgtggagatagaaagtgaaagtgtc
agtgaaaaaggtgacttggattattactggctggatcctgccacgtggcacagcagagag
acgtcccctattagttcgcatcccgtaacgtggcagccttccaaagagggagatcgctta
attgggcgtgttattcttaacaagagaacaaccatgcctaaagaatcaggtgcattactg
gggctgaaagttgttggaggaaaaatgacagaattaggacgactcggtgccttcattacc
aaagtgaagaaaggtagcttggctgatgtggtggggcatctcagagcaggagatgaagtt
ctagaatggaatggtaaacccttgcctggagctacaaatgaagaagtttacaacattatt
ttagaatcaaaatcagaacctcaagttgaaatcattgtttcaaggcctattggtgatatt
ccacggattcccgagacttcccaccccccattagagtctagttcaagttcttttgaatct
cagaagatggaaaggccttctatttctgttatatctccgactagtcctggagccctacgg
gatgcacctcaggtcctaccagggcagctttctgttaaactctggtatgacaaagtggga
caccagttaatagtgaatgttctacaggcaacagatttgccaccaagagtagatggacgc
cccagaaatccctatgtaaaaatgtattttcttccagacagaagtgataaaagtaaaaga
aggaccaaaacagtaaagaaaagtctagagccaaaatggaatcaaacttttctctactca
catgtacatcgtagagattttagagaacgaatgcttgaaatcacagtatgggatcagcca
agagtacaagaagaagagagtgaatttcttggagagattcttatagagctggagacagca
cttttagatgatgaaccacattggtataagctacagacacatgatgaatcttcactacct
ctgcctcagccatcaccattcatgccaagaagacatgttcatggtggagagagcactagc
aaaaaattacaaagatctcggccaatcagtgatagtgacatctcagattttgatgttgat
gatggtattggagttgttcctccagtaggttacaggtctagtactagagaaagtaaatcc
acaacgctaactgtgccagagcagcagagaacaacaacacatcatcgttcacgttccgtg
tctcctcaccgtggtgatgatcagggcaggccccgttcacgtttaccaaatgtgccatta
cagaggagtttagatgaaattcatcagatgagaagatcacgttctccaactagacaccat
gatgcctccagaactccagttgattacagatccagagagatggatagtcagtatttgtct
gatcaagaaagtgagcttcttatgctgcccagagcaaagcgaggaagaagtgcagagtgc
ctacacaccatcagtgaactgcagccctcccttgacagggctaggagtgctagtaccaac
tgcttgagaccagatactagtttgcattcaccagaacgagaaaggggtagatggtccccc
tccctagagaggagacgacctactagtcccaggattcatatccagcatgcatctccggag
gatgacaggcagtccagaaaagtggaaagatatagcagccaaaaacaagctaggaaaggc
cctgcagctgaaacagaaagaacgcatcagcaaggaagtcccacgcagtctcctcctgca
gacacctccttcagcagtcgtaggggaagacagctaccacaagttccagtaagaagtggc
agtatagagcaagcaagcttagtagtggaggagcgaacgagacagatgaaaatgaaagtg
caccgttataatcagacatcagggtctggttctagccaagaacatgagcgtgagcaatat
accaagtataacatacaaacagatcagtacagaagctgtgataacgtctctgccaaatca
tcagatagtgatgtcagtgatgtgtcagccatttcccgaaccagcagtgcctctcgcctc
agcagcacaagttttatgtcagagcaatctgagcgccctcggggcaggatcagtacattt
actcctaaaatgcaaggcagacggatggggacttcagggagaatcacaaagagcacaagt
gtgagtggagagatgtacaagctggagcacattgacgggagccagtcggacacggccgtc
ggcatggttggaacaggtgggaagaaaaggcgctccagctttagtgccaaagtggttgcc
atagtgtctcgaaggagcagaagcacatctcaacttagtcaaacagaggctggcagcaag
aagctaaagagcacgatacagagaagcacagaaacaggaatggcagcagagatgagaagt
cgtatggttcgacagccaagtcgagaatccactgatggcagcataaatagttatagctcc
gagggcaacctaatatttcctggagtacggctgggcgctgacagtcagttcagtgatttc
ctcgatggactaggacctgcacagttagtaggccgacaaacactagcaacccctgccatg
ggtgacatccagattggaatggtggataaaaaaggccagttagaagtagaagtcattaga
gcccgtggcctcatccaaaaacctggctccaaatctaccccagctccgtatgttaaagtg
tatttactggaaaatggagcatgtatagctaagaagaagacaagaattgcaaggaagaca
ctcgatcctctgtaccaacagacactggtttttgaggaaagtccacagggtaaagtcctt
caggtaatagtctggggagactatggccgaatggaccacaaatgcttcatgggagttgcc
cagatccttctggaggaactggatctgtccagcgtggtaataggctggtataaattattt
ccaccttcatcgctagtggatccaacattgactcccctgacacgtagggcttcccagtca
tctctggaaagttcaactgggcctccctgcattagatcatag
DBGET
integrated database retrieval system
