Geospiza fortis (medium ground-finch): 102034095
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Entry
102034095 CDS
T03755
Symbol
SRSF5
Name
(RefSeq) serine and arginine rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
gfr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102034095 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102034095 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102034095 (SRSF5)
Spliceosome [BR:
gfr03041
]
Common components
Common spliceosomal components
SR proteins
102034095 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
PRP38_assoc
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
102034095
NCBI-ProteinID:
XP_005417708
UniProt:
A0A6I9HCH6
LinkDB
All DBs
Position
Un
AA seq
238 aa
AA seq
DB search
RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS
ERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSWQDLK
DFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSKRHSR
SRSRSRSRSRSRSKSRSVSRSPLPSKSQKRVSSSRSKSPSSVDRQRSRSRSRSVDSGN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
cgtgtcttcatcgggaggctgaacccggccgccagggagaaggatgtggagaggttcttc
aaggggtacggccgcatccgcgacatcgacctgaagaggggcttcggcttcgtggagttt
gaggatccgagggatgcagatgatgctgtttatgaattggatggaaaagaactttgcagt
gaaagggtgaccattgagcatgccagagcgcgctcgaggggcagaggcagagggaggtac
tctgaccggttcagtagccgccgcccgcgcagtgacaggagaaacgccccacctctaaga
acagaaaatcgcctcatagtggaaaatttgtcttcccgtgtcagctggcaggatctcaaa
gacttcatgaggcaagccggggaagtaacctttgcagatgcacacagacctaagttaaat
gaaggggtggttgaatttgcctcttacagtgatttaaagaatgctattgaaaagctttct
ggtaaagaaatcaatggaaggaaaatcaaactaattgaaggcagcaaaaggcacagtagg
tcccggagcaggtcacggtcacgcagcaggagccgcagcaagtcacgatcagtcagcaga
tctccactgcccagcaagagccagaaacgggtttcttccagcagatccaaatctccgtca
tccgtagaccggcagaggtctagatcgaggtccagatctgttgacagtggcaactga
DBGET
integrated database retrieval system
