Geospiza fortis (medium ground-finch): 102034126
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Entry
102034126 CDS
T03755
Symbol
RARS
Name
(RefSeq) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102034126 (RARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gfr01007
]
102034126 (RARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfr03016
]
102034126 (RARS)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102034126 (RARS)
Enzymes [BR:
gfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
102034126 (RARS)
Amino acid related enzymes [BR:
gfr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
102034126 (RARS)
Transfer RNA biogenesis [BR:
gfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102034126 (RARS)
Prokaryotic type
Other AARSs
102034126 (RARS)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
102034126 (RARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
LisH_TPL
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
102034126
NCBI-ProteinID:
XP_005425439
LinkDB
All DBs
Position
Un
AA seq
664 aa
AA seq
DB search
MASPVPRNCCVTTQISFQENEIKLLSAEIERLKNFGCLGVSPSLEGLRDENAKLKYRLNF
LKKSLQEERSKSTKSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQPKFGDYQCNS
AMGISQILLKTREQKVSPREIAERIVKNIPANECIEKVEIAGPGFINVHLRKDFVSKHLS
SLLINGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLN
HLGDWGTQFGMLIAHLQDKFPDYLSVSPPIGDLQAFYKESKQRFDTEEEFKKRAYQCVVL
LQSKNPDFIKAWNLICDVSRREFQKIYNCLDITIIERGESFYHEMMKDIVKEFEDKGFVQ
VDDGRKVVFVPGFPVPLTIMKSDGGYTYDTSDLAALKHRLCEEKGDILIYVVDSGQSVHL
QTVFAAGQMIGWYDPKVTRVTHAAFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDK
LKDKERDKVLTPEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLY
AFTRIRAIARLANIDEQMLRKAAREEVLVLDHEKEWKLGKCILRFPEILQKILEDLLLHT
LCDYLYELATTFTEFYDSCYCVEKDRQTGQIVKVNMWRLLLCEATATVMAKGFDILGIKP
VQRM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccccgttcccaggaattgctgtgtgacaactcaaatttcttttcaggaaaac
gagatcaagttgttaagtgcagaaattgagcgtctgaagaactttgggtgcttgggagtc
tccccgagtttggaagggttgcgagacgaaaacgcaaaactcaagtaccggttaaacttc
ctaaagaagagccttcaagaggaaagaagtaaatcaaccaaaagcatgattaatatcaac
agctgtctccaggagatctttggagctgccattcaggctgcctacccagacttagaaaac
cctcctttagtggtgacaccaagtcagcagcccaaatttggggactaccagtgtaacagt
gccatgggcatatcacagatactgctcaaaaccagggaacagaaggttagcccacgagaa
attgcagagagaatagtaaaaaatattcctgccaatgaatgcattgagaaggtcgaaatt
gctggtcctggttttatcaatgtccacttgagaaaggattttgtgtcgaagcacctgagc
agtttattgatcaatggagttcaaccaccagctattggcaaaaggaaaaaggtggtggtg
gatttttcctcccctaacattgcaaaggagatgcacgttggccacctgcgctccaccatc
atcggggagagcatgtgccgcctcttcgagttcgtgggttatgacgttctcaggttgaac
catttaggagattggggcacccagtttggaatgctcattgctcacctccaggacaaattt
ccagattacttaagtgtttctcctcccattggggatctccaagcattttacaaggaatcc
aagcagaggtttgacacagaggaggagtttaagaagcgagcttaccaatgtgtggtgctg
ctgcagagcaaaaaccccgacttcattaaagcctggaatctcatctgcgacgtgtcacgc
agagaattccagaaaatctacaactgtttggacatcacaatcatagagagaggggaatcc
ttctaccatgagatgatgaaagacattgtgaaagaatttgaagataaagggtttgtccag
gttgatgatggcaggaaggtcgtgttcgtgccgggtttcccagtgccgctgacaatcatg
aaatcagacggaggttacacctatgacacatcagacctggctgctctgaagcacaggctg
tgtgaagagaagggtgacatcctcatctacgttgttgatagtggccagtctgtgcatctc
caaacagtgtttgcagctggacagatgattggctggtatgatcccaaagtcaccagagtg
acccatgctgcctttggagtggtgctgggagaagacaagaagaagttcaagactcgttca
ggggacacggtgcgtcttatagacctgctggaggaaggactgaaacgagccatggacaag
ctgaaagacaaggaacgggacaaggtcctgacgccagaagagctgaaagctgcccagaca
tccgtggcttttggatgcattaaatatgcagatctgtcccacaacaggctcaatgattac
gtgttctcctttgacaagatgctggatgaccgagggaacacagctgcctatctgctctat
gccttcacacgcatcagggccattgctcgcctggccaacatcgatgagcagatgctgcgg
aaggcagccagggaggaggtgcttgtccttgaccatgagaaggagtggaaactgggcaag
tgcatcctgaggtttcctgagatcctgcagaagatcctggaggacttgttattgcacaca
ctctgtgactacctgtatgagctggccaccaccttcaccgagttctacgacagctgctac
tgcgtggagaaggacaggcagactggccagattgtgaaggtgaacatgtggaggctgctg
ctgtgcgaagccactgccaccgtcatggccaagggattcgacatcctgggcattaagcct
gtgcagaggatgtag
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