Geospiza fortis (medium ground-finch): 102034136
Help
Entry
102034136 CDS
T03755
Symbol
USP48
Name
(RefSeq) ubiquitin specific peptidase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102034136 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102034136 (USP48)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102034136 (USP48)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102034136 (USP48)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102034136 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
102034136
NCBI-ProteinID:
XP_005428287
UniProt:
A0A6I9HSV3
LinkDB
All DBs
Position
Un
AA seq
922 aa
AA seq
DB search
MWFLNLELRQALYLCPSACGDGVPKDADYEPQTICEHLQYLFALLQNSKRRYIDPSAFVK
ALGLDTGQQQDAQEFSKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRES
KLVSKFYELELNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPC
TLNLQLMRFVFDRQTGHKKKLNTYIGFSELLDMEPFMEQKNGVYVYELSAVLIHRGVSAY
SGHYIAHVKDPQTGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCS
RNAYMLVYRLQAREKSLTVQVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEE
VKELYQRLPAEAGSPYDFISLEWLQKWLDESTPPKPIDNTACLCSHGKLHPDKISLMKRI
SEYVADFFYRRYGGGPRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKMTVKGTD
GFWVGKASLRSWRQLALEQLNEQDEDAEHSNGKMNGNAQNKDESNEEKREEEEELNFNED
IVCPHGDLCISENERRVVSKEAWEKLKQYFPKAPEFPNNKECCSQCKILEREGEENEALH
KMMASEQKTSLQNLFHDKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSI
ANSVLLCPHGGLMFTFASMTKEDSKHIALIWPSEWERIQKLFVVDHVIKITRTQTAEGAR
YASEPQLCPECREGLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEE
REENKPEGEQDPDFNQANGGTKRQKLSHQSYITYQKQGIRRSTRHRKVRGEKALLVSANQ
TLKELKIQIMHAFSVAPFDQNLSLDGKILSDDTATLGSLGVIPESVILLKADEPIADYAA
MDDVMQVCMPEEGFKGTGLLGH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcctgaacctggagctgcggcaggcgctctacctgtgccccagcgcctgcggg
gatggcgttcccaaggacgcagactatgagccccagaccatctgtgagcacctgcagtac
ctgtttgctctgctgcagaacagcaagcggcgctacatcgacccctcagcctttgtcaag
gcgctggggctggacacagggcagcagcaggatgcccaggagttttccaagctgttcatg
tccctgctggaagatactttgtccaaacagaaaaacccagatgtccggaacattgtgcaa
aagcagttctgtggagagtatgcctatgtcacagtctgcaaccagtgtggcagagaatct
aaactggtgtctaaattttacgagctggagttaaacatccaaggacacaagcagttgaca
gactgtataacagaattcctcaaggaggaaaaattagaaggggacaatcgttatttttgt
gagacttgtcagagcaagcaaaacgccacgaggaagatccggctgctcagcctgccttgc
accctgaacctgcagctcatgcgctttgtgtttgacagacaaactggccacaagaagaag
ctgaacacctacattggcttctcagagctgctggacatggagcctttcatggagcaaaaa
aacggggtgtacgtgtacgagctgagcgctgtgctcatacaccgtggagtaagcgcctac
tccgggcactacatcgcccacgtgaaggacccgcagacaggagagtggtacaagttcaac
gatgaggacattgagaagatggaggggaagaaactccagctgggaattgaggaagatcta
gcagagccatcgaaatcccagacccgcaagcccaagtgcgggaagggcacgcactgctcc
cgcaacgcctacatgctggtgtacaggctgcaggcccgggagaaatccctcactgtgcaa
gtgccagcttttctgcaggagctggtagagcgggataactgcaagtttgaggagtggtgc
aacgaaatggccgagatgcgcaaacagagcgtggccagaggcaagatcaagcacgaggag
gtgaaggagctctaccaaaggttacccgccgaagctggttccccttacgacttcatttct
ctggaatggctgcagaagtggctggatgagtccactcctcccaaacctattgataacaca
gcctgcctgtgctcccatggcaaactccatcctgataaaatatccctgatgaagaggata
tcagaatacgtggccgacttcttctaccggcgatacggaggagggccccggctcaatgtc
aaagcactttgcaaggactgtgtggtggaaaggtgtcgaatcctgaggctgaagaaccag
ctgaacgaggactacaaaaccgtcaccaacctgctgaagatgacggtcaaggggaccgat
gggttttgggttggaaaagcctccttgaggagctggcgtcagctggctctggagcaatta
aatgagcaagatgaagatgcagagcacagtaatggaaaaatgaatggaaatgcacaaaac
aaagatgaatcaaatgaagagaagagggaggaggaagaggagttaaattttaatgaagac
atcgtttgcccacatggtgacctgtgcatctctgaaaatgaacggagggtggtttccaag
gaagcctgggagaaactcaagcaatattttccaaaagcccctgaattcccaaataacaaa
gagtgctgttcccagtgcaagattttggagcgtgaaggggaggaaaatgaagctctgcat
aagatgatggccagtgagcagaagacttccctgcagaacctgttccatgataaatgcagg
ccttgcctgggcagctggcctcaggagacagatgagctgtatattgtttcgcagttcttt
gtagaagaatggaggaaatttgtcaggaggccgacgcgctgcagccccgtgtcctccata
gcaaacagtgtcctgctctgtccccacggggggctcatgttcacctttgcttccatgacc
aaagaagactccaaacatatagctctgatatggcccagtgagtgggagaggatccaaaag
ctctttgtcgtggatcacgtcatcaaaatcacccggacccagacggccgagggcgcccgc
tacgcctccgagccccagctgtgccccgagtgccgggaagggctcctgtgccagcagcag
cgggacctgcgcgagtacacccaggccaccatctacatccacaaagtggtggacaacaaa
aaggtaatgaaggacgcggctccagagctgaacgtgagcagctcggaagctgaagaggaa
agggaggaaaacaagccagagggggagcaagatcccgattttaaccaggccaacggtggc
acaaaacgccagaagctgtcccaccagagctacatcacctaccaaaaacagggcatcagg
agaagcacacggcaccgcaaggtccggggagagaaagctctgcttgtgtcagccaaccag
accctgaaagagctgaaaatccagatcatgcacgccttctccgtggcccccttcgaccag
aacctgtccctggatgggaagatcctgagtgatgacacggccacgctgggcagcctggga
gtgatccctgagtctgtcatcctgctcaaggctgacgagcccatcgcggattacgcggcc
atggacgacgttatgcaagtttgtatgcctgaagagggatttaaagggactggtttactt
ggccactga
DBGET
integrated database retrieval system
