Geospiza fortis (medium ground-finch): 102034152
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Entry
102034152 CDS
T03755
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross complementing 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102034152 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102034152 (XRCC5)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102034152 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
102034152
NCBI-ProteinID:
XP_005415838
UniProt:
A0A6I9HBK4
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Position
Un
AA seq
749 aa
AA seq
DB search
MGSNSAGQNRQATEECDSQVWLHDSVEKVAVVLCLDVGLTMSSSSPGEETSLDQAKKIMT
KFVQRQVFAESKDEVAVVLFGTNGTRNGLASEDQYQNITVHRSLMLPDFDLLEDIQNVIK
AGSAQADFLDAIIVCMDLLQKETIGKKYEKRHIELFTDLSSPVSEDQLEIIIANLKKTGT
SLQFFLPFPVSVDDGSGDKSASVHAHMHKNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGG
LEEIYTFRESLERLSMFKKMERKPMPWPCQLTIGPNLSIRIVAYKSVTEERVKKLWAIVD
AKTLRKEDVQKETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCF
SVLGFTRSSQIQRHYYMGNQALKVFAAKDDANAAVAFSALVRALDELKVVAVVRYAYDRR
CYPQIGVAFPYIKDTYECLIYVQLPYMEDLRQYVFTSLKNSKKCIPTVDQLYAVDSLIDS
MNLVHEDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHSDKPLPPIEQHLLEMLEMPCVV
RERCQAPLERVKALFPLKEVGKKKEEKTAQDIFKDNEDEPSLKKPKIEDDEESFSLMKLA
EGNITSVGSVNPAEDFRILVRKKNADFKDVSQQLINRIDQFLENKGSQYYMKGIDCIRAF
REEAMKLSKVQCFNDFLQALKSKLEDKALSDFWEIMVQERISLITKDEAEGSLVTGEEAE
KFLAPKEQKNETLPPTDEGGDVDDLLDMM
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcaattctgcaggacagaacaggcaggctacagaagagtgtgattctcaagtg
tggctccatgacagtgtggaaaaggtggcagtagtgctgtgcctggatgtaggccttaca
atgagcagttcttcccctggtgaagagacttcacttgaccaagccaagaagattatgaca
aagttcgtgcagcgacaggtttttgctgagagtaaagatgaagtcgctgtagttctgttt
ggcactaatggcactagaaatggccttgccagtgaggatcaataccaaaacattactgta
catagatcactaatgctgccagattttgatctgctggaagacattcaaaatgtgattaaa
gcaggctctgcacaagcagactttctggatgctattattgtgtgtatggatttgcttcag
aaagaaacaataggaaagaaatatgagaagagacacattgaattgtttacagaccttagt
agtcctgtcagtgaggatcagctggaaattatcattgctaacttgaagaaaacgggaact
tcacttcagttttttctgccattcccagtgagtgttgatgatggaagtggagataaaagt
gccagtgtgcatgctcatatgcacaaaaactcttttccaataaagggtttaactgaacaa
cagaagcaaggtattgatgtggtgaggaagctcatgtatactttggatgaagaaggagga
ctggaagaaatttatactttcagagagagcctggaacgcctttcaatgtttaagaaaatg
gaaagaaagcctatgccttggccctgccagctcactattggtcctaatttgtctataagg
attgtggcctacaaatcagtcacagaagaaagagtgaaaaaactttgggcaattgtggat
gctaaaaccctcagaaaagaggatgtgcaaaaagaaactgtttactgcttgaatgatgat
gatgagacagaggttcagaaagatgatactattcaaggttttcggtatgggagtgatata
gttcctttttccaaggaagatgaagagcaaatgaaatacaaaacagaaggaaagtgtttt
tctgttttgggattcactagatcctctcagatccagaggcattactacatgggcaaccaa
gctctgaaggtctttgcagcaaaagatgatgcgaatgcagcagttgctttttctgcactt
gttcgtgcattggatgagttgaaagtggtggctgtagtgcgctatgcttatgatagaaga
tgctatccacaaattggagtagcttttccatatattaaagatacatatgagtgtctcatc
tatgtgcagctaccctatatggaagacctaagacaatatgtatttacatccttgaaaaac
agtaaaaaatgcattcctacagtggatcagttgtatgctgttgactcactgattgattct
atgaatttggttcatgaagatggagaaacttttgaggatctatttaagcccagcaaaatt
ccaaaccctcattttcagagattatatcagtgtttgcagcacaaggcttttcactctgat
aagccactgccaccaatagaacagcatcttttagaaatgctagagatgccttgtgtggta
agagaaagatgtcaggctcctctggaaagagtaaaagcactttttcccctaaaggaagtt
ggcaagaaaaaagaagagaagactgcacaagacatcttcaaagacaatgaagatgaaccc
agccttaagaaaccaaaaattgaagatgacgaagagagctttagccttatgaaacttgct
gaaggcaatatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtg
aggaagaaaaatgctgacttcaaagatgtgagtcagcagttgataaaccgcattgatcag
ttcttggaaaataaaggttcccagtactacatgaaagggattgactgtatcagagctttt
agagaggaggccatgaagctgtccaaggtgcagtgctttaatgactttctgcaggcactg
aaatcaaagttggaagataaagccttatctgatttctgggagatcatggtacaagaacgg
atttctttgatcactaaagatgaagcagaaggaagtttggtgacaggtgaagaggctgag
aagttcttggctccaaaggaacagaaaaatgaaactctgcctcctacagatgaaggtggt
gatgttgatgatctgctggacatgatgtga
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