Geospiza fortis (medium ground-finch): 102034233
Help
Entry
102034233 CDS
T03755
Symbol
TAF4
Name
(RefSeq) TATA-box binding protein associated factor 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102034233 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102034233 (TAF4)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102034233 (TAF4)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102034233 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
102034233 (TAF4)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102034233 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
102034233
NCBI-ProteinID:
XP_005423678
LinkDB
All DBs
Position
Un
AA seq
940 aa
AA seq
DB search
MATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGP
GSVGKGNTVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPASVGTGAPTVTLVR
PPIHTAGPTVAAAAAATQNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSS
VPAAPAAQVIKSESPKTIVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLSNVAPNPGG
IPPAAPGTPTGMAKGTANTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQN
FQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTV
QAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVWPQIVLGGTAQTTTLGTATA
VQTGTPQRTVQGTTATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQS
LLDGKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQ
ATIATIPSVTSVLLSSSVQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQ
QSQKAGALIRPPQVTLTQTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAI
ATVSTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTR
SCKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRN
ISYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLK
QKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVG
TTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccttgtccaccaggaatggcaagattgggaccacgacggtgcagactttg
aatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttctctgggact
cctgtgactgccaaccccgctcctgcacctgctgttgcccctctcgttaacaatggaccc
ggatccgtggggaaaggaaacactgttaatgctgttttaccctcagcttctaacactgtc
atccagacttctttccttaatactgctgtgtcctctgcatcctcctcgtcgcccacagtg
atctcctcgcagccaccggcgagcgtcggcaccggggcgcccacggtgacgctggtgagg
ccccccatccacacagcaggacccacggtggctgcagctgctgcagccactcagaacggg
agcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgttgccacagcc
actgtgggatctggagtttccctccagacatcgcttgtgaacagccagtctggttccagt
gtgccagcagctcctgccgcacaggtcatcaaatctgagtctcctaaaacgatagtccag
gcagtatcccaacagcagacgctggctactgctggccagcccagtactacagggggtaac
atgattattgggcaaactatgcaagctgggctctccaatgttgctcccaatcctggtggg
atacctcctgcagctcctggcacccccacaggaatggctaaaggcactgccaatacagtg
gcacaaagtctgccaaggactccaacaccaactacgagtggaatcagagcaactttgact
cctacagttttagcacctcgtttgcctcagccacctcagaatccgactaacattcagaat
tttcagttaccaccaggcatggtgctggtgcgcagtgagaacgggcagctgctgatgatc
ccccagcaagccctggcacagatgcaggcccaggcacacgcccagtctcagcctcagaac
actctgactcctcgtcctgctacaccaaccagtgcacccccagtgcagatatccacagtg
caggctccaggaacacccattattgcacgacaggtgacaccaactactatcatcaagcaa
gtgtctcaggctcaaacaacagtgcaacccacgaccacgctacagcggcccccggttgtg
tggcctcagatcgttctgggtggtactgcacaaacaaccacgttggggacagcaacagct
gtacaaactggaactcctcagagaacagtgcaagggacaacggccacctccactgctgcc
acagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacattaataaaactg
gcatcatctggaaaacagtcctcagagactgcggctaacgtgaaggaattagtacagagt
ctgctggatggaaaaattgaaccagaagattttaccagtaggctctacagagaacttaat
tcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgccttgagacag
ttaacaccagactctgcagctttcattcagcagagccagcagcagcagcccacgacgcag
gcaacgatagccacgatcccgtcggtgacgtctgtgctgctgagctcctcggtgcagcgc
acagcgggcaaggccactgccactgtcaccagtaccctccagcaacctgtcatcagcctc
actcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactggttattcaa
cagtctcaaaaagcaggggcattgataaggcctccacaagtaacgttgacacagacaccc
atggtggcattgcggcaaccacacagtcgtatcatgctcaccactcctcaaatccaactg
aatcaactgcagacagtacctgtggtaaaaccagcagtattacctggaaacaaagctatt
gccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaacctggggga
ggctcttttagggatgatgatgacattaatgatgttgcatcaatggctggagtcaacctg
tcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcacactaacacgg
tcctgtaaagacgaaaccttccttttcccagcacctttacaaagaaggatattagaaata
ggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgtatcacatgct
acacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaacaaaggaat
atttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggcacagctcaag
ttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaaagggaaatt
ttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagcttaggttgaaa
cagaaggccaaggagatgcagcagcaagagctagcacaaatgagacagagggatgccaac
ctgactgcgttagctgccattggtcccaggaagaaaaggaaagtagattccccaggatct
ggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctctggagttgga
acaaccagacagtttacgcgacagaggataacgcgggtgaacctcagggacctcatattt
tgtttagaaaatgagcgagagacaagccattcactattgctatacaaagcattccttaag
taa
DBGET
integrated database retrieval system
